The application of strand invasion phenomenon, directed by peptide nucleic acid (PNA) and single-stranded DNA binding protein (SSB) for the recognition of specific sequences of human endogenous retroviral HERV-W family

Grzegorz Machnik; Łukasz Bułdak; Jarosław Ruczyński; Tomasz Gąsior; Małgorzata Huzarska; Dariusz Belowski; Magdalena Alenowicz; Piotr Mucha; Piotr Rekowski; Bogusław Okopień

doi:10.1002/jmr.2600

The application of strand invasion phenomenon, directed by peptide nucleic acid (PNA) and single-stranded DNA binding protein (SSB) for the recognition of specific sequences of human endogenous retroviral HERV-W family

Journal of Molecular Recognition ◽

10.1002/jmr.2600 ◽

2016 ◽

Vol 30 (5) ◽

pp. e2600 ◽

Cited By ~ 2

Author(s):

Grzegorz Machnik ◽

Łukasz Bułdak ◽

Jarosław Ruczyński ◽

Tomasz Gąsior ◽

Małgorzata Huzarska ◽

...

Keyword(s):

Nucleic Acid ◽

Dna Binding ◽

Peptide Nucleic Acid ◽

Binding Protein ◽

Dna Binding Protein ◽

Single Stranded Dna ◽

Strand Invasion ◽

Specific Sequences

Interactive Roles of DNA Helicases and Translocases with the Single-Stranded DNA Binding Protein RPA in Nucleic Acid Metabolism

International Journal of Molecular Sciences ◽

10.3390/ijms18061233 ◽

2017 ◽

Vol 18 (6) ◽

pp. 1233 ◽

Cited By ~ 13

Author(s):

Sanket Awate ◽

Robert Brosh, Jr.

Keyword(s):

Nucleic Acid ◽

Dna Binding ◽

Acid Metabolism ◽

Binding Protein ◽

Dna Binding Protein ◽

Nucleic Acid Metabolism ◽

Single Stranded Dna ◽

Dna Helicases

Strand invasion of conventional PNA to arbitrary sequence in DNA assisted by single-stranded DNA binding protein

Chemical Communications ◽

10.1039/b813975j ◽

2009 ◽

pp. 1225 ◽

Cited By ~ 12

Author(s):

Takumi Ishizuka ◽

Kosuke Otani ◽

Jun Sumaoka ◽

Makoto Komiyama

Keyword(s):

Dna Binding ◽

Binding Protein ◽

Dna Binding Protein ◽

Arbitrary Sequence ◽

Single Stranded Dna ◽

Strand Invasion

An EPR study to determine the relative nucleic acid binding affinity of single-stranded DNA-binding protein from Escherichia coli

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology ◽

10.1016/0167-4838(91)99010-p ◽

1991 ◽

Vol 1078 (2) ◽

pp. 199-207 ◽

Cited By ~ 5

Author(s):

Elisabeth V. Bobst ◽

Fred W. Perrino ◽

Ralph R. Meyer ◽

Albert M. Bobst

Keyword(s):

Escherichia Coli ◽

Nucleic Acid ◽

Dna Binding ◽

Binding Affinity ◽

Binding Protein ◽

Dna Binding Protein ◽

Nucleic Acid Binding ◽

Single Stranded Dna

Role of Saccharomyces Single-Stranded DNA-Binding Protein RPA in the Strand Invasion Step of Double-Strand Break Repair

PLoS Biology ◽

10.1371/journal.pbio.0020021 ◽

2004 ◽

Vol 2 (1) ◽

pp. e21 ◽

Cited By ~ 79

Author(s):

Xuan Wang ◽

James E Haber

Keyword(s):

Dna Binding ◽

Binding Protein ◽

Dna Binding Protein ◽

Strand Break ◽

Double Strand Break ◽

Double Strand Break Repair ◽

Single Stranded Dna ◽

Strand Invasion ◽

Break Repair

Variability in the nucleic acid binding site size and the amount of single-stranded DNA-binding protein inEscherichia coli

FEBS Letters ◽

10.1016/0014-5793(85)81128-5 ◽

1985 ◽

Vol 181 (1) ◽

pp. 133-137 ◽

Cited By ~ 21

Author(s):

E.V. Bobst ◽

A.M. Bobst ◽

F.W. Perrino ◽

R.R. Meyer ◽

D.C. Rein

Keyword(s):

Nucleic Acid ◽

Dna Binding ◽

Binding Site ◽

Binding Protein ◽

Dna Binding Protein ◽

Inescherichia Coli ◽

Nucleic Acid Binding ◽

Single Stranded Dna

Probing the nucleic acid binding modes of the single‐stranded DNA binding protein of the bacteriophage T4 replication complex

The FASEB Journal ◽

10.1096/fasebj.27.1_supplement.541.2 ◽

2013 ◽

Vol 27 (S1) ◽

Author(s):

Davis Jose ◽

Steven E. Weitzel ◽

Peter H. Hippel

Keyword(s):

Nucleic Acid ◽

Dna Binding ◽

Binding Protein ◽

Bacteriophage T4 ◽

Dna Binding Protein ◽

Binding Modes ◽

Nucleic Acid Binding ◽

Single Stranded Dna ◽

Replication Complex

Reversibility of strand invasion promoted by recA protein and its inhibition by Escherichia coli single-stranded DNA-binding protein or phage T4 gene 32 protein.

Journal of Biological Chemistry ◽

10.1016/s0021-9258(19)57379-3 ◽

1988 ◽

Vol 263 (1) ◽

pp. 200-209

Author(s):

S A Chow ◽

B J Rao ◽

C M Radding

Keyword(s):

Escherichia Coli ◽

Dna Binding ◽

Binding Protein ◽

Reca Protein ◽

Dna Binding Protein ◽

Single Stranded Dna ◽

Phage T4 ◽

Strand Invasion ◽

Gene 32 ◽

T4 Gene 32 Protein

Faculty Opinions recommendation of Mechanism of RecO recruitment to DNA by single-stranded DNA binding protein.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.13356061.14726199 ◽

2011 ◽

Author(s):

William Holloman ◽

Jeanette Sutherland

Keyword(s):

Dna Binding ◽

Binding Protein ◽

Dna Binding Protein ◽

Single Stranded Dna

Faculty Opinions recommendation of Intrinsically disordered C-terminal tails of E. coli single-stranded DNA binding protein regulate cooperative binding to single-stranded DNA.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.725298790.793503146 ◽

2015 ◽

Author(s):

Vladimir Uversky

Keyword(s):

Dna Binding ◽

Binding Protein ◽

Dna Binding Protein ◽

Cooperative Binding ◽

Single Stranded Dna ◽

E Coli ◽

Intrinsically Disordered

Crystal Structure of a New Single-Stranded DNA-Binding Protein Encoded by Staphylococcal Cassette Chromosome Elements

SSRN Electronic Journal ◽

10.2139/ssrn.3155811 ◽

2018 ◽

Author(s):

Ignacio Mir-Sanchis ◽

Ying Z. Pigli ◽

Phoebe A. Rice

Keyword(s):

Crystal Structure ◽

Dna Binding ◽

Binding Protein ◽

Dna Binding Protein ◽

Single Stranded Dna