scholarly journals Front Cover: Acceleration of an Enzymatic Reaction in Liquid Phase Separated Compartments Based on Intrinsically Disordered Protein Domains (ChemSystemsChem 4/2020)

2020 ◽  
Vol 2 (4) ◽  
Author(s):  
Andreas M. Küffner ◽  
Marc Prodan ◽  
Remo Zuccarini ◽  
Umberto Capasso Palmiero ◽  
Lenka Faltova ◽  
...  
2020 ◽  
Vol 2 (4) ◽  
Author(s):  
Andreas M. Küffner ◽  
Marc Prodan ◽  
Remo Zuccarini ◽  
Umberto Capasso Palmiero ◽  
Lenka Faltova ◽  
...  

2020 ◽  
Vol 2 (4) ◽  
Author(s):  
Andreas M. Küffner ◽  
Marc Prodan ◽  
Remo Zuccarini ◽  
Umberto Capasso Palmiero ◽  
Lenka Faltova ◽  
...  

2021 ◽  
Author(s):  
Sonia T. Nicolaou ◽  
Max Hebditch ◽  
Owen J. Jonathan ◽  
Chandra S. Verma ◽  
Jim Warwicker

AbstractCharge is a key determinant of intrinsically disordered protein (IDP) and intrinsically disordered region (IDR) properties. IDPs and IDRs are enriched in sites of phosphorylation, which alters charge. Visualizing the degree to which phosphorylation modulates the charge profile of a sequence would assist in the functional interpretation of IDPs and IDRs. PhosIDP is a web tool that shows variation of charge and fold propensity upon phosphorylation. In combination with the displayed location of protein domains, the information provided by the web tool can lead to functional inferences for the consequences of phosphorylation. IDRs are components of many proteins that form biological condensates. It is shown that IDR charge, and its modulation by phosphorylation, is more tightly controlled for proteins that are essential for condensate formation than for those present in condensates but inessential.


Viruses ◽  
2021 ◽  
Vol 13 (7) ◽  
pp. 1349
Author(s):  
Guido Papa ◽  
Alexander Borodavka ◽  
Ulrich Desselberger

Viroplasms are cytoplasmic, membraneless structures assembled in rotavirus (RV)-infected cells, which are intricately involved in viral replication. Two virus-encoded, non-structural proteins, NSP2 and NSP5, are the main drivers of viroplasm formation. The structures (as far as is known) and functions of these proteins are described. Recent studies using plasmid-only-based reverse genetics have significantly contributed to elucidation of the crucial roles of these proteins in RV replication. Thus, it has been recognized that viroplasms resemble liquid-like protein–RNA condensates that may be formed via liquid–liquid phase separation (LLPS) of NSP2 and NSP5 at the early stages of infection. Interactions between the RNA chaperone NSP2 and the multivalent, intrinsically disordered protein NSP5 result in their condensation (protein droplet formation), which plays a central role in viroplasm assembly. These droplets may provide a unique molecular environment for the establishment of inter-molecular contacts between the RV (+)ssRNA transcripts, followed by their assortment and equimolar packaging. Future efforts to improve our understanding of RV replication and genome assortment in viroplasms should focus on their complex molecular composition, which changes dynamically throughout the RV replication cycle, to support distinct stages of virion assembly.


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