scholarly journals Using Endogenous MicroRNA Expression Patterns to Visualize Neural Differentiation of Human Pluripotent Stem Cells

Author(s):  
Agnete Kirkeby ◽  
Malin Parmar ◽  
Johan Jakobsson
2019 ◽  
Author(s):  
Anna Shcherbina ◽  
Jingling Li ◽  
Cyndhavi Narayanan ◽  
William Greenleaf ◽  
Anshul Kundaje ◽  
...  

Understanding the molecular properties of the cell cycle of human pluripotent stem cells (hPSCs) is critical for effectively promoting differentiation. Here, we use the Fluorescence Ubiquitin Cell Cycle Indicator (FUCCI) system adapted into hPSCs and perform RNA-sequencing on cell cycle sorted hPSCs primed and unprimed for differentiation. Gene expression patterns of signaling factors and developmental regulators change in a cell cycle-specific manner in cells primed for differentiation without altering genes associated with pluripotency. Furthermore, we identify an important role for PI3K signaling in regulating the early transitory states of hPSCs towards differentiation.


2017 ◽  
Vol 2017 ◽  
pp. 1-9 ◽  
Author(s):  
Abdullah J. Alshawaf ◽  
Ana Antonic ◽  
Efstratios Skafidas ◽  
Dominic Chi-Hung Ng ◽  
Mirella Dottori

Mutations in WD40-repeat protein 62 (WDR62) are commonly associated with primary microcephaly and other developmental cortical malformations. We used human pluripotent stem cells (hPSC) to examine WDR62 function during human neural differentiation and model early stages of human corticogenesis. Neurospheres lacking WDR62 expression showed decreased expression of intermediate progenitor marker, TBR2, and also glial marker, S100β. In contrast, inhibition of c-Jun N-terminal kinase (JNK) signalling during hPSC neural differentiation induced upregulation of WDR62 with a corresponding increase in neural and glial progenitor markers, PAX6 and EAAT1, respectively. These findings may signify a role of WDR62 in specifying intermediate neural and glial progenitors during human pluripotent stem cell differentiation.


2015 ◽  
Vol 51 (8) ◽  
pp. 769-775 ◽  
Author(s):  
Sumiyo Mimura ◽  
Mika Suga ◽  
Yujung Liu ◽  
Masaki Kinehara ◽  
Kana Yanagihara ◽  
...  

2019 ◽  
Vol 12 (5) ◽  
pp. 869-877 ◽  
Author(s):  
Yefim Zaltsman ◽  
Sayaka Masuko ◽  
Joshua J. Bensen ◽  
Laura L. Kiessling

2021 ◽  
Vol 17 (3) ◽  
pp. e1008778
Author(s):  
Jared Brown ◽  
Christopher Barry ◽  
Matthew T. Schmitz ◽  
Cara Argus ◽  
Jennifer M. Bolin ◽  
...  

Human pluripotent stem cells hold significant promise for regenerative medicine. However, long differentiation protocols and immature characteristics of stem cell-derived cell types remain challenges to the development of many therapeutic applications. In contrast to the slow differentiation of human stem cells in vitro that mirrors a nine-month gestation period, mouse stem cells develop according to a much faster three-week gestation timeline. Here, we tested if co-differentiation with mouse pluripotent stem cells could accelerate the differentiation speed of human embryonic stem cells. Following a six-week RNA-sequencing time course of neural differentiation, we identified 929 human genes that were upregulated earlier and 535 genes that exhibited earlier peaked expression profiles in chimeric cell cultures than in human cell cultures alone. Genes with accelerated upregulation were significantly enriched in Gene Ontology terms associated with neurogenesis, neuron differentiation and maturation, and synapse signaling. Moreover, chimeric mixed samples correlated with in utero human embryonic samples earlier than human cells alone, and acceleration was dose-dependent on human-mouse co-culture ratios. The altered gene expression patterns and developmental rates described in this report have implications for accelerating human stem cell differentiation and the use of interspecies chimeric embryos in developing human organs for transplantation.


2013 ◽  
Vol 91 (10) ◽  
pp. 1247-1262 ◽  
Author(s):  
Alexander E. Stover ◽  
David J. Brick ◽  
Hubert E. Nethercott ◽  
Maria G. Banuelos ◽  
Lei Sun ◽  
...  

2011 ◽  
Vol 8 (6) ◽  
pp. 695-706 ◽  
Author(s):  
Hyesoo Kim ◽  
Gabsang Lee ◽  
Yosif Ganat ◽  
Eirini P. Papapetrou ◽  
Inna Lipchina ◽  
...  

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