Fungal Transformation: From Protoplasts to Targeted Recombination Systems

Author(s):  
Juan F. Martín
2004 ◽  
Vol 8 (4) ◽  
pp. 353-366 ◽  
Author(s):  
Afgan Farooq ◽  
Bentham Science Publisher Atta-ur-Rahman ◽  
M. Choudhary

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Brittany C. Clawson ◽  
Emily J. Pickup ◽  
Amy Ensing ◽  
Laura Geneseo ◽  
James Shaver ◽  
...  

AbstractLearning-activated engram neurons play a critical role in memory recall. An untested hypothesis is that these same neurons play an instructive role in offline memory consolidation. Here we show that a visually-cued fear memory is consolidated during post-conditioning sleep in mice. We then use TRAP (targeted recombination in active populations) to genetically label or optogenetically manipulate primary visual cortex (V1) neurons responsive to the visual cue. Following fear conditioning, mice respond to activation of this visual engram population in a manner similar to visual presentation of fear cues. Cue-responsive neurons are selectively reactivated in V1 during post-conditioning sleep. Mimicking visual engram reactivation optogenetically leads to increased representation of the visual cue in V1. Optogenetic inhibition of the engram population during post-conditioning sleep disrupts consolidation of fear memory. We conclude that selective sleep-associated reactivation of learning-activated sensory populations serves as a necessary instructive mechanism for memory consolidation.


1994 ◽  
Vol 14 (10) ◽  
pp. 6663-6673
Author(s):  
J B Scheerer ◽  
G M Adair

Using simple linear fragments of the Chinese hamster adenine phosphoribosyltransferase (APRT) gene as targeting vectors, we have investigated the homology dependence of targeted recombination at the endogenous APRT locus in Chinese hamster ovary (CHO) cells. We have examined the effects of varying either the overall length of targeting sequence homology or the length of 5' or 3' flanking homology on both the frequency of targeted homologous recombination and the types of recombination events that are obtained. We find an exponential (logarithmic) relationship between length of APRT targeting homology and the frequency of targeted recombination at the CHO APRT locus, with the frequency of targeted recombination dependent upon both the overall length of targeting homology and the length of homology flanking each side of the target gene deletion. Although most of the APRT+ recombinants analyzed reflect simple targeted replacement or conversion of the target gene deletion, a significant fraction appear to have arisen by target gene-templated extension and correction of the targeting fragment sequences. APRT fragments with limited targeting homology flanking one side of the target gene deletion yield proportionately fewer target gene conversion events and proportionately more templated extension and vector correction events than do fragments with more substantial flanking homology.


Author(s):  
Kashyap Dave ◽  
Manmeet Ahuja ◽  
T. N. Jayashri ◽  
Rekha Bisht Sirola ◽  
Khyati Dave ◽  
...  

1987 ◽  
Vol 7 (9) ◽  
pp. 3297-3305
Author(s):  
B G Turgeon ◽  
R C Garber ◽  
O C Yoder

A novel strategy was used to develop a transformation system for the plant pathogenic fungus Cochliobolus heterostrophus. Sequences capable of driving the expression of a gene conferring resistance to the antibiotic hygromycin B in C. heterostrophus were selected from a library of genomic DNA fragments and used, with the selectable marker, as the basis for transformation. The library of random 0.5- to 2.0-kilobase-pair fragments of C. heterostrophus genomic DNA was inserted at the 5' end of a truncated, promoterless Escherichia coli hygromycin B phosphotransferase gene (hygB) whose product confers resistance to hygromycin B. C. heterostrophus protoplasts were transformed with the library and selected for resistance. Resistant colonies arose at low frequency. Each colony contained a transformation vector stably integrated into chromosomal DNA. When the transforming DNA was recovered from the genome and introduced into C. heterostrophus, resistant colonies appeared at higher frequency. We determined the sequences of two of the C. heterostrophus DNA fragments which had been inserted at the 5' end of hygB in the promoter library and found that both made translational fusions with hygB. One of the two fusions apparently adds 65 and the other at least 86 amino acids to the N-terminus of the hygB product. Plasmids containing hygB-C. heterostrophus promoter fusions can be used unaltered to drive hygB expression in several other filamentous ascomycetes. This approach to achieving transformation may have general utility, especially for organisms with relatively undeveloped genetics.


2020 ◽  
Vol 38 ◽  
pp. 107-111
Author(s):  
Abdelsamed I. Elshamy ◽  
Abeer A. Abd El Aty ◽  
Tatsuro Yoneyama ◽  
Taha A. Hussien ◽  
Hiroshi Imagawa ◽  
...  

2017 ◽  
Vol 27 (16) ◽  
pp. 3825-3828 ◽  
Author(s):  
Mohamed-Elamir F. Hegazy ◽  
Ahmed A. El-Beih ◽  
Ahmed R. Hamed ◽  
Abeer A. Abd El Aty ◽  
Naglaa S. Mohamed ◽  
...  

2012 ◽  
Vol 6 (1) ◽  
Author(s):  
Naik Tameen Khan ◽  
Marium Bibi ◽  
Sammer Yousuf ◽  
Izhar Husain Qureshi ◽  
Atta-ur-Rahman ◽  
...  

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