Comparative genetic structure within single-origin pairs of rice (Oryza sativa L.) landraces from in situ and ex situ conservation programs in Yunnan of China using microsatellite markers

2012 ◽  
Vol 59 (8) ◽  
pp. 1611-1623 ◽  
Author(s):  
Jian-Chang Sun ◽  
Gui-Lan Cao ◽  
Jing Ma ◽  
Yao-Feng Chen ◽  
Long-Zhi Han
Keyword(s):  
Oryza Sativa ◽  
Genetic Structure ◽  
Microsatellite Markers ◽  
Ex Situ Conservation ◽  
Oryza Sativa L ◽  
Ex Situ ◽  
Conservation Programs ◽  
Single Origin

SEED FEATURES OF IMPORTANT TIMBER SPECIES FROM THE FLOODPLAIN VÁRZEA FOREST: IMPLICATIONS FOR EX SITU CONSERVATION PROGRAMS IN THE AMAZON

2013 ◽  
Vol 9 (2) ◽  
pp. 7-19 ◽  
Author(s):  
Auristela Dos Santos Conserva ◽  
Denise Garcia de Santana ◽  
Maria Teresa Fernandez Piedade
Keyword(s):  
Ex Situ Conservation ◽  
Ex Situ ◽  
Timber Species ◽  
Conservation Programs

scholarly journals Status of the Ex Situ and In Situ Conservation of Brazilian Crop Wild Relatives of Rice, Potato, Sweet Potato, and Finger Millet: Filling the Gaps of Germplasm Collections

Agronomy ◽  
2021 ◽  
Vol 11 (4) ◽  
pp. 638
Author(s):  
Marcelo B. Medeiros ◽  
José F. M. Valls ◽  
Aluana G. Abreu ◽  
Gustavo Heiden ◽  
Suelma Ribeiro-Silva ◽  
...  
Keyword(s):  
Finger Millet ◽  
Ex Situ Conservation ◽  
Gap Analysis ◽  
In Situ Conservation ◽  
Germplasm Collection ◽  
Crop Wild Relatives ◽  
Wild Relatives ◽  
Ex Situ ◽  
The Status

This study presents the status of ex situ and in situ conservation for the crop wild relatives of rice, potato, sweet potato, and finger millet in Brazil, and the subsequent germplasm collection expeditions. This research is part of a global initiative entitled “Adapting Agriculture to Climate Change: Collecting, Protecting, and Preparing Crop Wild Relatives” supported by the Global Crop Diversity Trust. Species of the primary, secondary, and tertiary gene pools with occurrences reported in Brazil were included: Oryza alta Swallen, O. grandiglumis (Döll) Prod., O. latifolia Desv., O. glumaepatula Steud., Eleusine tristachya (Lam.) Lam., E. indica (L.) Gaertn., Solanum commersonii Dunal, S. chacoense Bitter, Ipomoea grandifolia (Dammer) O’Donell, I. ramosissima (Poir.) Choisy, I. tiliacea (Willd.) Choisy, I. triloba L., and I. cynanchifolia Meisn. The status of the ex situ and in situ conservation of each taxon was assessed using the gap analysis methodology, and the results were used to plan 16 germplasm collection expeditions. Seeds of the collected material were evaluated for viability, and the protocols for seed germination and cryopreservation were tested. The final conservation score, resulting from the gap analysis and including the average of the ex situ and in situ scores, resulted in a classification of medium priority of conservation for all the species, with the exception of I. grandifolia (high priority). The total accessions collected (174) almost doubled the total accessions of these crop wild relatives incorporated in Embrapa’s ex situ conservation system prior to 2015. In addition, accessions for practically absent species were collected for the ex situ conservation system, such as Ipomoea species, Eleusine indica, and Solanum chacoense. The methods used for dormancy breaking and low temperature conservation for the Oryza, Eleusine, and Ipomoea species were promising for the incorporation of accessions in the respective gene banks. The results show the importance of efforts to collect and conserve ex situ crop wild relatives in Brazil based on previous gap analysis. The complementarity with the in situ strategy also appears to be very promising in the country.

Diversity among different populations of a locally common rice (Oryza sativa L.) landrace from north-western Indian Himalayas

2010 ◽  
Vol 8 (2) ◽  
pp. 151-158 ◽  
Author(s):  
S. Kumar ◽  
A. Pandey ◽  
I. S. Bisht ◽  
K. V. Bhat ◽  
P. S. Mehta
Keyword(s):  
Oryza Sativa ◽  
Oryza Sativa L ◽  
Morphological Characters ◽  
Ex Situ ◽  
Evolutionary Forces ◽  
Minimum Number ◽  
Environmental Adaptations ◽  
Farmer Management ◽  
Different Populations ◽  
On Farm

Genetic structure of five populations of a locally common rice (Oryza sativa L.) landrace Jaulia from parts of Uttarakhand state of India was studied using sequence tagged microsatellite site (STMS) markers. Of these, four populations were on-farm managed, assembled from different niche environments, and one population was conserved ex situ and represented static conservation. The 16 STMS primer pairs fully differentiated the inter- and intrapopulation diversity. A total of 72 alleles were recorded with a mean of 4.5 alleles per locus. Population wise, the total number of alleles ranged from 21 to 41, with maximum number of alleles for population IC 548358 and minimum number of alleles for population IC 100051 representing static conservation. A greater number of alleles specific to populations under farmer management could be recorded. Changes in yield parameters also seemed to be affected under farmer management besides other environmental adaptations for qualitative morphological characters. The marker diversity using STMS primer pairs indicates the genetic differentiation among populations resulting from joint effects of several evolutionary forces operating within the historical and biological context of the crop landrace. The variations in adaptations, on the other hand, indicate the degree to which populations are adapted to their environments and their potential for continued performance or as donors of characters in plant breeding. Both biotic and abiotic aspects of the environment are involved.

Conservation and Change: A Comparison of In situ and Ex situ Conservation of Jala Maize Germplasm

Crop Science ◽  
2006 ◽  
Vol 46 (1) ◽  
pp. 428-436 ◽  
Author(s):  
Elizabeth B. Rice ◽  
Margaret E. Smith ◽  
Sharon E. Mitchell ◽  
Stephen Kresovich
Keyword(s):  
Ex Situ Conservation ◽  
Ex Situ ◽  
Maize Germplasm

In Situ and Ex Situ Conservation of Coconut Genetic Resources

2020 ◽  
pp. 51-75
Author(s):  
Roland Bourdeix ◽  
Steve Adkins ◽  
Vincent Johnson ◽  
Lalith Perera ◽  
Sisunandar
Keyword(s):  
Genetic Resources ◽  
Ex Situ Conservation ◽  
Ex Situ

scholarly journals Ex situ conservation of genetic resources of field elm (Ulmus minor Mill) and European white elm (Ulmus laevis Pall)

Genetika ◽  
2004 ◽  
Vol 36 (3) ◽  
pp. 221-227
Author(s):  
Jelena Aleksic ◽  
Sasa Orlovic
Keyword(s):  
Genetic Resources ◽  
Ex Situ Conservation ◽  
Ex Situ ◽  
In Vitro Production ◽  
Ulmus Minor ◽  
Conservation Of Genetic Resources ◽  
Ulmus Laevis ◽  
Vitro Production

Principles of the conservation of genetic resources of elms (Ulmus spp) do not differ fundamentally from the general principles accepted for the conservation of genetic resources of other common Noble Hardwoods. Efficient conservation can best be achieved through appropriate combination of in situ and ex situ methods, which have distinct advantages. Besides that, ex situ conservation is employed when emergency measures are needed for rare endangered populations and when populations are too small to be managed in situ (e.g. risks of genetic drift and inbreeding). The aim of our research is ex situ conservation of genetic resources of field elm {Ulmus minor Mill) and European white elm (Ulmus laevis Pall) through establishment of field genebanks. Sampling was conducted in one population of field elm and one population of white elm. Plant material (buds) from 8 trees of field elm and 10 trees of white elm was used for in vitro production of clones. Obtained clones will be used for establishment of field genebanks on the experimental estate of the Institute of Lowland Forestry and Environment.

Effects of a Proposed Ex Situ Conservation Program on In Situ Conservation of the Babirusa, an Endangered Suid

2000 ◽  
Vol 14 (2) ◽  
pp. 382-385 ◽  
Author(s):  
L. M. Clayton ◽  
E. J. Milner‐Gulland ◽  
D. W. Sinaga ◽  
A. H. Mustari
Keyword(s):  
Ex Situ Conservation ◽  
In Situ Conservation ◽  
Ex Situ ◽  
Conservation Program

Genetic diversity analyzed by microsatellite markers among rice (Oryza sativa L.) genotypes with different adaptations to saline soils

Plant Science ◽  
2004 ◽  
Vol 166 (5) ◽  
pp. 1275-1285 ◽  
Author(s):  
Linghe Zeng ◽  
Taek-Ryoun Kwon ◽  
Xuan Liu ◽  
Clyde Wilson ◽  
Catherine M. Grieve ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Oryza Sativa ◽  
Microsatellite Markers ◽  
Oryza Sativa L ◽  
Saline Soils
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