The complete mitochondrial genome of an endemic cichlid Etroplus canarensis from Western Ghats, India (Perciformes: Cichlidae) and molecular phylogenetic analysis

2022 ◽  
Author(s):  
Joelin Joseph ◽  
Sandeep Sreeedharan ◽  
Sanil George ◽  
Mano Mohan Antony
Keyword(s):  
Phylogenetic Analysis ◽  
Mitochondrial Genome ◽  
Western Ghats ◽  
Complete Mitochondrial Genome ◽  
Molecular Phylogenetic Analysis ◽  
Molecular Phylogenetic

scholarly journals Characterization of the complete mitochondrial genome of Meira sp. (Exobasidiales: Brachybasidiaceae) with phylogenetic analysis

2020 ◽  
Vol 5 (3) ◽  
pp. 2607-2608
Author(s):  
Yuanhang Ren ◽  
Lidan Lu ◽  
Maoling Tan ◽  
Yanan Cao ◽  
Lianxin Peng
Keyword(s):  
Phylogenetic Analysis ◽  
Mitochondrial Genome ◽  
Complete Mitochondrial Genome

scholarly journals Molecular Phylogenetic Analysis of the AIG Family in Vertebrates

Genes ◽  
2021 ◽  
Vol 12 (8) ◽  
pp. 1190
Author(s):  
Yuqi Huang ◽  
Minghao Sun ◽  
Lenan Zhuang ◽  
Jin He
Keyword(s):  
Phylogenetic Analysis ◽  
Gene Family ◽  
Functional Characterization ◽  
Vertebrate Evolution ◽  
Molecular Phylogenetic Analysis ◽  
Whole Genome Duplications ◽  
Genome Duplications ◽  
Molecular Phylogenetic ◽  
Duplication Events ◽  
Inducible Genes

Androgen-inducible genes (AIGs), which can be regulated by androgen level, constitute a group of genes characterized by the presence of the AIG/FAR-17a domain in its protein sequence. Previous studies on AIGs demonstrated that one member of the gene family, AIG1, is involved in many biological processes in cancer cell lines and that ADTRP is associated with cardiovascular diseases. It has been shown that the numbers of AIG paralogs in humans, mice, and zebrafish are 2, 2, and 3, respectively, indicating possible gene duplication events during vertebrate evolution. Therefore, classifying subgroups of AIGs and identifying the homologs of each AIG member are important to characterize this novel gene family further. In this study, vertebrate AIGs were phylogenetically grouped into three major clades, ADTRP, AIG1, and AIG-L, with AIG-L also evident in an outgroup consisting of invertebrsate species. In this case, AIG-L, as the ancestral AIG, gave rise to ADTRP and AIG1 after two rounds of whole-genome duplications during vertebrate evolution. Then, the AIG family, which was exposed to purifying forces during evolution, lost or gained some of its members in some species. For example, in eutherians, Neognathae, and Percomorphaceae, AIG-L was lost; in contrast, Salmonidae and Cyprinidae acquired additional AIG copies. In conclusion, this study provides a comprehensive molecular phylogenetic analysis of vertebrate AIGs, which can be employed for future functional characterization of AIGs.

scholarly journals The complete mitochondrial genome and phylogenetic analysis of Ischnochiton hakodaensis (Carpenter, 1893)

2019 ◽  
Vol 4 (2) ◽  
pp. 2619-2621 ◽  
Author(s):  
Yutong Cui ◽  
Xiaoyu Guo ◽  
Shanshan Wang ◽  
Yanran Xu ◽  
Xiaoyue Sun ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Mitochondrial Genome ◽  
Complete Mitochondrial Genome
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