Structural variability in the bulk soil, rhizosphere, and root endophyte fungal communities of Themeda japonica plants under different grades of karst rocky desertification

2021 ◽  
Author(s):  
Ming Tang ◽  
Jie Liu ◽  
Wenpeng Hou ◽  
Reed M. Stubbendieck ◽  
Han Xiong ◽  
...  
Keyword(s):  
Fungal Communities ◽  
Bulk Soil ◽  
Karst Rocky Desertification ◽  
Rocky Desertification ◽  
Root Endophyte ◽  
Structural Variability ◽  
Soil Rhizosphere

scholarly journals Effect of karst rocky desertification on soil fungal communities in Southwest China

2016 ◽  
Vol 15 (3) ◽  
Author(s):  
P.C. Wang ◽  
B.T. Mo ◽  
Y. Chen ◽  
Q.F. Zeng ◽  
L.B. Wang
Keyword(s):  
Southwest China ◽  
Fungal Communities ◽  
Karst Rocky Desertification ◽  
Rocky Desertification

Alkaline soil pH affects bulk soil, rhizosphere and root endosphere microbiomes of plants growing in a Sandhills ecosystem

2021 ◽  
Vol 97 (4) ◽  
Author(s):  
Lucas Dantas Lopes ◽  
Jingjie Hao ◽  
Daniel P Schachtman
Keyword(s):  
Microbial Communities ◽  
Plant Species ◽  
Soil Ph ◽  
Soil Microbial Communities ◽  
Bulk Soil ◽  
Strong Impact ◽  
Alkaline Soil ◽  
Alkaline Soils ◽  
Soil Microbial ◽  
Soil Rhizosphere

ABSTRACT Soil pH is a major factor shaping bulk soil microbial communities. However, it is unclear whether the belowground microbial habitats shaped by plants (e.g. rhizosphere and root endosphere) are also affected by soil pH. We investigated this question by comparing the microbial communities associated with plants growing in neutral and strongly alkaline soils in the Sandhills, which is the largest sand dune complex in the northern hemisphere. Bulk soil, rhizosphere and root endosphere DNA were extracted from multiple plant species and analyzed using 16S rRNA amplicon sequencing. Results showed that rhizosphere, root endosphere and bulk soil microbiomes were different in the contrasting soil pH ranges. The strongest impact of plant species on the belowground microbiomes was in alkaline soils, suggesting a greater selective effect under alkali stress. Evaluation of soil chemical components showed that in addition to soil pH, cation exchange capacity also had a strong impact on shaping bulk soil microbial communities. This study extends our knowledge regarding the importance of pH to microbial ecology showing that root endosphere and rhizosphere microbial communities were also influenced by this soil component, and highlights the important role that plants play particularly in shaping the belowground microbiomes in alkaline soils.

scholarly journals Analysis of the Bacterial and Fungal Community Profiles in Bulk Soil and Rhizospheres of Three Mungbean [Vigna radiata (L.) R. Wilczek] Genotypes through PCR-DGGE

2020 ◽  
Vol 77 ◽  
pp. 1-26
Author(s):  
Anna Mae M. de los Reyes ◽  
Eureka Teresa M. Ocampo ◽  
Ma. Carmina C. Manuel ◽  
Bernadette C. Mendoza
Keyword(s):  
Plant Growth ◽  
Crop Production ◽  
Denaturing Gradient Gel Electrophoresis ◽  
Diversity Index ◽  
Agricultural Practices ◽  
Fungal Communities ◽  
Bulk Soil ◽  
Initial Assessment ◽  
Rhizosphere Effect ◽  
Soil Microbial Diversity

Each plant species is regarded to substantially influence and thus, select for specific rhizosphere microbial populations. This is considered in the exploitation of soil microbial diversity associated with important crops, which has been of interest in modern agricultural practices for sustainable productivity. This study used PCR-DGGE (polymerase chain reaction - denaturing gradient gel electrophoresis) in order to obtain an initial assessment of the bacterial and fungal communities associated in bulk soil and rhizospheres of different mungbean genotypes under natural field conditions. Integrated use of multivariate analysis and diversity index showed plant growth stage as the primary driver of community shifts in both microbial groups while rhizosphere effect was found to be less discrete in fungal communities. On the other hand, genotype effect was not discerned but not inferred to be absent due to possible lack of manifestations of differences among genotypes based on tolerance to drought under non-stressed environment, and due to detection limits of DGGE. Sequence analysis of prominent members further revealed that Bacillus and Arthrobacter species were dominant in bacterial communities whereas members of Ascomycota and Basidiomycota were common in fungal communities of mungbean. Overall, fungal communities had higher estimated diversity and composition heterogeneity, and were more dynamic under plant growth influence, rhizosphere effect and natural environmental conditions during mungbean growth in upland field. These primary evaluations are prerequisite to understanding the interactions between plant and rhizosphere microorganisms with the intention of employing their potential use for sustainable crop production.

scholarly journals Discussing the Genesis of Karst Rocky Desertification-research Based on the Correlations between Crop land and Settlement in Typical Peak-cluster Depressions

2016 ◽  
Author(s):  
Yang Bing Li ◽  
Qiong Yao Li ◽  
Guang Jie Luo ◽  
Xiao Yong Bai ◽  
Yong Yan Wang ◽  
...  
Keyword(s):  
Population Pressure ◽  
Guizhou Province ◽  
Residential Areas ◽  
Karst Rocky Desertification ◽  
Rocky Desertification ◽  
Peak Cluster ◽  
Natural Mechanism ◽  
The Relationship ◽  
Local Farmers

Abstract. This paper attempts to explain the theoretical reasons why the local farmers took irrational activities such as steep slope land cultivations in order to reveal the mechanism of Karst Rocky Desertification (KRD) through those typical case studies. Firstly, this paper assumes that the low land capacity is the genesis cause of KRD in peak cluster-depression areas. Furthermore, the ecological quality of the peak cluster-depression zone is influenced by the relationship between the area of depressions and the population of residential areas. The results show that, six typical peak cluster-depression areas in Guizhou Province were selected to compare the distribution circumstances of croplands, the characteristics of settlements and the formation of KRD. Also, the results show that there is a negative correlation between the percentage of the cultivated land and the percentage of KRD (including light KRD, moderate KRD and severe KRD at peak cluster-depressions. The relationship could be concluded as three situations of the process of KRD, which are low, middle and upper carrying capacity of land. The severe KRD is only distributed in peak-cluster depression areas with less flatland, low land capacity and high population. The harmonization between population pressure and bearing capacity of land will influence the ecological qualities in the peak cluster depressions. Therefore, the hypothesis suggested by this paper is correct, and this result will contribute to understanding the natural mechanism of KRD and guide the ecological restoration of KRD land.

Recovery Dynamics of Vegetation and Soil Properties in Karst Rocky Desertification Areas in Guizhou, China

2012 ◽  
Vol 518-523 ◽  
pp. 4532-4544 ◽  
Author(s):  
Hong Yan Liu ◽  
Fang Liu
Keyword(s):  
Soil Fertility ◽  
Soil Properties ◽  
Vegetation Structure ◽  
Vegetation Recovery ◽  
Native Forest ◽  
Forming Process ◽  
Karst Rocky Desertification ◽  
Rocky Desertification ◽  
Available Nitrogen ◽  
Dynamics Of Vegetation

Abstract. Dynamics of vegetation and soil properties responses to vegetation recovery in the selected 72 Karst desertification sites in Guizhou, China were studied. Six typical and representative vegetation types along a chronosequence of vegetation recovery (corn land, sparse grass, regeneration forest, shrub, grass and shrub, and native forest with 0, 3-5, 10-15, 20-30, 30-40, and >100 yrs, respectively) were selected for the study of the plant species, vegetation features as well as soil physical & chemical properties in order to assess interaction between soil properties and vegetation structure. It was found that vegetation species had dry-resistant characteristics because of their extensive exposure to the basement rocks and thinness soil. Grass community was always coarse grass, shrub was generally dominated by vines, thorn bushes and tree species were almost leather-like, single and mini-type leaf plants. Factor analysis showed that the 3 factors, soil fertility, pH and clay, explain 67.97 % of total variance among the 19 soil property parameters. Soil fertility changed significantly effects included the increasing of soil organic matter, total and available nitrogen, humic acid, CEC, fuvic acid, exchange Ca, porosity and total P but decreasing bulk density. This trend was followed by enhancing of bio-enrichment capacity along the chronosequence of vegetation recovering process. Soil pH had no significant correlation with the vegetation recovery stages because it was determined by soil forming process and characteristic of parent materials. The factor clay only decreased slightly in the recovery stages. Cluster analysis indicated that vegetation structure could develop within short time under anthropocentric interfering, but soil fertility only accumulated with annual litter decomposing. We can conclude that recovery of vegetation community structure proceeded restoration of soil function.

Dynamic variations in soil moisture in an epikarst fissure in the karst rocky desertification area

2020 ◽  
Vol 591 ◽  
pp. 125587
Author(s):  
Yuan Li ◽  
Ziqi Liu ◽  
Guohua Liu ◽  
Kangning Xiong ◽  
Lulu Cai
Keyword(s):  
Soil Moisture ◽  
Karst Rocky Desertification ◽  
Rocky Desertification ◽  
Dynamic Variations
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