Clusterwise elastic-net regression based on a combined information criterion

2022 ◽  
Author(s):  
Xavier Bry ◽  
Ndèye Niang ◽  
Thomas Verron ◽  
Stéphanie Bougeard
Keyword(s):  
Information Criterion ◽  
Elastic Net

Cluster Analysis of Antigenic Profiles of Tumors: Selection of Number of Clusters Using Akaike’s Information Criterion

1990 ◽  
Vol 29 (03) ◽  
pp. 200-204 ◽  
Author(s):  
J. A. Koziol
Keyword(s):  
Cluster Analysis ◽  
Basic Problem ◽  
Information Criterion ◽  
Akaike's Information Criterion ◽  
Cell Surface Antigens ◽  
Number Of Clusters ◽  
Akaike’S Information Criterion ◽  
Multinomial Data ◽  
Tumor Types ◽  
Selection Of

AbstractA basic problem of cluster analysis is the determination or selection of the number of clusters evinced in any set of data. We address this issue with multinomial data using Akaike’s information criterion and demonstrate its utility in identifying an appropriate number of clusters of tumor types with similar profiles of cell surface antigens.

An Improved Elastic Net for Cancer Classification and Gene Selection

2010 ◽  
Vol 36 (7) ◽  
pp. 976-981 ◽  
Author(s):  
Jun-Tao LI ◽  
Ying-Min JIA
Keyword(s):  
Gene Selection ◽  
Elastic Net ◽  
Cancer Classification

Prognosticating the spread of covid-19 pandemic based on optimal arima estimators

2020 ◽  
Vol 20 ◽  
Author(s):  
Venuka Sandhir ◽  
Vinod Kumar ◽  
Vikash Kumar
Keyword(s):  
South Africa ◽  
Statistical Analysis ◽  
Moving Average ◽  
Arima Model ◽  
Information Criterion ◽  
Stable Case ◽  
Johns Hopkins University ◽  
Modelling Techniques ◽  
Auto Regressive ◽  
Global Threat

Background: COVID-19 cases have been reported as a global threat and several studies are being conducted using various modelling techniques to evaluate patterns of disease dispersion in the upcoming weeks. Here we propose a simple statistical model that could be used to predict the epidemiological extent of community spread of COVID-19from the explicit data based on optimal ARIMA model estimators. Methods: Raw data was retrieved on confirmed cases of COVID-19 from Johns Hopkins University (https://github.com/CSSEGISandData/COVID-19) and Auto-Regressive Integrated Moving Average (ARIMA) model was fitted based on cumulative daily figures of confirmed cases aggregated globally for ten major countries to predict their incidence trend. Statistical analysis was completed by using R 3.5.3 software. Results: The optimal ARIMA model having the lowest Akaike information criterion (AIC) value for US (0,2,0); Spain (1,2,0); France (0,2,1); Germany (3,2,2); Iran (1,2,1); China (0,2,1); Russia (3,2,1); India (2,2,2); Australia (1,2,0) and South Africa (0,2,2) imparted the nowcasting of trends for the upcoming weeks. These parameters are (p, d, q) where p refers to number of autoregressive terms, d refers to number of times the series has to be differenced before it becomes stationary, and q refers to number of moving average terms. Results obtained from ARIMA model showed significant decrease cases in Australia; stable case for China and rising cases has been observed in other countries. Conclusion: This study tried their best at predicting the possible proliferate of COVID-19, although spreading significantly depends upon the various control and measurement policy taken by each country.

scholarly journals Maximum Likelihood Analysis of Rare Binary Traits Under Different Modes of Inheritance

Genetics ◽  
1996 ◽  
Vol 143 (4) ◽  
pp. 1819-1829 ◽  
Author(s):  
G Thaller ◽  
L Dempfle ◽  
I Hoeschele
Keyword(s):  
Maximum Likelihood ◽  
Mixed Model ◽  
Major Gene ◽  
Likelihood Ratio Statistic ◽  
Information Criterion ◽  
Genetic Models ◽  
Parameter Estimates ◽  
Gene Effects ◽  
Binary Traits ◽  
Deterministic Algorithms

Abstract Maximum likelihood methodology was applied to determine the mode of inheritance of rare binary traits with data structures typical for swine populations. The genetic models considered included a monogenic, a digenic, a polygenic, and three mixed polygenic and major gene models. The main emphasis was on the detection of major genes acting on a polygenic background. Deterministic algorithms were employed to integrate and maximize likelihoods. A simulation study was conducted to evaluate model selection and parameter estimation. Three designs were simulated that differed in the number of sires/number of dams within sires (10/10, 30/30, 100/30). Major gene effects of at least one SD of the liability were detected with satisfactory power under the mixed model of inheritance, except for the smallest design. Parameter estimates were empirically unbiased with acceptable standard errors, except for the smallest design, and allowed to distinguish clearly between the genetic models. Distributions of the likelihood ratio statistic were evaluated empirically, because asymptotic theory did not hold. For each simulation model, the Average Information Criterion was computed for all models of analysis. The model with the smallest value was chosen as the best model and was equal to the true model in almost every case studied.

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