Genome-wide identification of the GATA gene family in potato (Solanum tuberosum L.) and expression analysis

2021 ◽  
Author(s):  
Ruimin Yu ◽  
Yannan Chang ◽  
Huize Chen ◽  
Jinlin Feng ◽  
Huanjun Wang ◽  
...  
Keyword(s):  
Solanum Tuberosum ◽  
Gene Family ◽  
Expression Analysis ◽  
Solanum Tuberosum L ◽  
Genome Wide ◽  
Gata Gene

scholarly journals Genome-wide identification and expression analysis of StPP2C gene family in response to multiple stresses in potato (Solanum tuberosum L.)

2020 ◽  
Vol 19 (6) ◽  
pp. 1609-1624
Author(s):  
Yi-fan WANG ◽  
Yu-qiu LIAO ◽  
Ya-peng WANG ◽  
Jiang-wei YANG ◽  
Ning ZHANG ◽  
...  
Keyword(s):  
Solanum Tuberosum ◽  
Gene Family ◽  
Expression Analysis ◽  
Solanum Tuberosum L ◽  
Multiple Stresses ◽  
Genome Wide

scholarly journals MYB Gene Family in Potato (Solanum tuberosum L.): Genome-Wide Identification of Hormone-Responsive Reveals Their Potential Functions in Growth and Development

2019 ◽  
Vol 20 (19) ◽  
pp. 4847 ◽  
Author(s):  
Wenjun Sun ◽  
Zhaotang Ma ◽  
Hui Chen ◽  
Moyang Liu
Keyword(s):  
Solanum Tuberosum ◽  
Gene Family ◽  
Stress Responses ◽  
Growth And Development ◽  
Solanum Tuberosum L ◽  
Potential Functions ◽  
Anthocyanin Synthesis ◽  
Myb Gene ◽  
Genome Wide ◽  
R2r3 Myb

As an important nongrain crop, the growth and yield of potato (Solanum tuberosum L.) is often affected by an unfavorable external environment in the process of cultivation. The MYB family is one of the largest and most important gene families, participating in the regulation of plant growth and development and response to abiotic stresses. Several MYB genes in potato that regulate anthocyanin synthesis and participate in abiotic stress responses have been identified. To identify all Solanum tuberosum L. MYB (StMYB) genes involved in hormone or stress responses to potentially regulate potato growth and development, we identified the MYB gene family at the genome-wide level. In this work, 158 StMYB genes were found in the potato genome. According to the amino acid sequence of the MYB domain and gene structure, the StMYB genes were divided into R2R3-MYB and R1R2R3-MYB families, and the R2R3-MYB family was divided into 20 subgroups (SGs). The expression of 21 StMYB genes from different SGs in roots, stems, leaves, flowers, shoots, stolons, young tubers, and mature tubers was determined by quantitative real-time polymerase chain reaction (qRT-PCR). The expression patterns of StMYB genes in potatoes treated with abscisic acid (ABA), indole-3-acetic acid (IAA), gibberellin acid 3 (GA3), NaCl, mannitol, and heat were also measured. We have identified several potential candidate genes that regulate the synthesis of potato flavonoids or participate in hormone or stress responses. This work provides a comprehensive understanding of the MYB family in potato and will lay a foundation for the future investigation of the potential functions of StMYB genes in the growth and development of potato.

Genome-wide identification and expression analysis of the StSWEET family genes in potato (Solanum tuberosum L.)

2019 ◽  
Vol 42 (2) ◽  
pp. 135-153 ◽  
Author(s):  
Ming Li ◽  
Haijuan Xie ◽  
Miaomiao He ◽  
Wang Su ◽  
Yongzhi Yang ◽  
...  
Keyword(s):  
Solanum Tuberosum ◽  
Expression Analysis ◽  
Solanum Tuberosum L ◽  
Genome Wide

Genome-wide identification and expression analysis of sulfate transporter (SULTR) genes in potato (Solanum tuberosum L.)

Planta ◽  
2016 ◽  
Vol 244 (6) ◽  
pp. 1167-1183 ◽  
Author(s):  
Recep Vatansever ◽  
Ibrahim Koc ◽  
Ibrahim Ilker Ozyigit ◽  
Ugur Sen ◽  
Mehmet Emin Uras ◽  
...  
Keyword(s):  
Solanum Tuberosum ◽  
Expression Analysis ◽  
Solanum Tuberosum L ◽  
Sulfate Transporter ◽  
Genome Wide

Identification and expression analysis of StGRAS gene family in potato (Solanum tuberosum L.)

2019 ◽  
Vol 80 ◽  
pp. 195-205
Author(s):  
Shulin Wang ◽  
Ning Zhang ◽  
Xi Zhu ◽  
Jiangwei Yang ◽  
Shigui Li ◽  
...  
Keyword(s):  
Solanum Tuberosum ◽  
Gene Family ◽  
Expression Analysis ◽  
Solanum Tuberosum L
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