Internal Transcribed Spacer (ITS) Region Targeted Molecular Characterization of Macroalgal Diversity Along the Overlooked Expanse of Gulf of Kachchh, India

Author(s):  
Dhara Dixit ◽  
Nikunj Balar ◽  
Mrugesh Trivedi ◽  
Poornima Suthar ◽  
C. R. K. Reddy ◽  
...  
2016 ◽  
Vol 41 (2) ◽  
pp. 527-533
Author(s):  
Souti Prasad Sarkhel ◽  
Surender Kumar Gupta ◽  
Jyoti Kaushik ◽  
Jarnail Singh ◽  
Deepak Kumar Gaur ◽  
...  

2002 ◽  
Vol 92 (8) ◽  
pp. 893-899 ◽  
Author(s):  
D. E. Carling ◽  
R. E. Baird ◽  
R. D. Gitaitis ◽  
K. A. Brainard ◽  
S. Kuninaga

Rhizoctonia solani anastomosis group (AG)-13 was collected from diseased roots of field grown cotton plants in Georgia in the United States. Isolates of AG-13 did not anastomose with tester isolates of AG-1 through AG-12. Mycelium of all isolates of AG-13 were light brown but darkened as cultures aged. All isolates produced aerial mycelium. Concentric rings were visible after 3 to 4 days of growth but disappeared as cultures aged and darkened. Individual sclerotia were up to 1.5 mm in diameter, similar in color to the mycelium, and generally embedded in the agar. Clumps of sclerotia up to 5 mm in diameter were produced on the agar surface. All attempts to induce basidiospore production were unsuccessful. The 5.8S region of the rDNA from isolates of AG-13 was identical in length and sequence to isolates of all other AGs of R. solani. Length and sequence of the internal transcribed spacer (ITS) regions of rDNA from isolates of AG-13 were unique among AGs of R. solani. Similarity between AG-13 and other AGs of R. solani ranged from 68 to 85% for ITS region 1 and 85 to 95% for ITS region 2. Selected isolates of AG-13 caused minor or no damage to barley, cauliflower, cotton, lettuce, potato, and radish in laboratory or greenhouse studies.


2021 ◽  
Vol 75 (6) ◽  
pp. 418
Author(s):  
Kartika Senjarini ◽  
Muhammad Abdullah ◽  
Nuril Azizah ◽  
Miatin Septianasari ◽  
Ahmad Tosin ◽  
...  

Author(s):  
Savithri Purayannur ◽  
Michael J Munster ◽  
Matthew A Bertone ◽  
Lina Quesada-Ocampo

In this brief, we report the observation of downy mildew caused by Peronospora chenopodii-ambrosioidis on epazote (Dysphania ambrosioides) in North Carolina, USA. We performed morphological characterization of the sporangia and sporangiophores for identification. We also confirmed the identity of the pathogen by performing an alignment and generating a Maximum Likelihood phylogeny of the concatenated internal transcribed spacer (ITS) region and cytochrome c oxidase subunit I (cox1) sequences.


2019 ◽  
Vol 15 (1) ◽  
pp. 46-54
Author(s):  
Bose Chitrakani ◽  
◽  
Senthuran Sureshkumar ◽  
Pandy Rajapriya ◽  
Mohan Pandi

2018 ◽  
Vol 68 ◽  
pp. 9-18
Author(s):  
Dang Hoang Trang ◽  
Dang Van Dong ◽  
Bui Huu Chung ◽  
Dong Huy Gioi ◽  
Tran Dang Khanh

Ochna integerrima is a medicinal and ornamental plant, is widely distributed in Southeast Asia areas. In Vietnam, it has been ranked as the rare and endangered species due to its high demand trade of the beautiful species. In this study, total 21 Ochna samples, collected from the northern and southern areas, were used to characterize the morphological traits using morphological analyses and molecular tool. The results have revealed that the morphological characterization of flower and its quality of Yen Tu Ochna samples showed differences in comparison with the common Ochna and southern Ochna samples. To accurately distinguish genetic traits of the samples, we have sequenced the internal transcribed spacer (ITS) region (including ITS1, 5.8S) of 21 species. The results have disclosed the genetic correlations of the samples ranging from 96.25% to 100% among the studied Ochna samples, of which 5 samples include B1, B2, B3, B6 and N3.1 were divided into the separate groups. The current work is the first report in constructing a molecular database of Ochna for further assessment of inter-and intra-specific molecular diversity of Ochna species in Vietnam.


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