Microbial desalination cell (MDC) built on surface modification has been studied for seawater desalination. Herein, the bio-catalytic surface modification for maintenance the long-term MDC performance during desalination process has been developed. The goal of this study is to provide and develop a seawater desalination system without requiring energy support by applying a modification of anode as an electron acceptor, and the different potential charges that occur between anode and cathode can play as driving force for electrodialysis of seawater desalination. Yeast has been applied as biocatalyst, meanwhile neutral red has been chosen as redox mediator to facilitate the electron transport from bioactivity of cells. Several types of surface modification have been conducted, i.e. biocatalyst-mediator immobilization and electropolymerization of NR at the surface of the anode. The optimization of each device has been characterized by cyclic voltammetry, chronoamperometry, and observed in Microbial fuel cell (MFC) prior functioned in MDC. The concentrations of salt ion migration have been determined by Ion Exchange Chromatography. MFC results reported that the best configuration of surface modification was obtained from CF/PNR then applied in MDC. CF/PNR delivered the highly significant performance by having the maximum value of all tested parameters, i.e 42.2% of current efficiency; 27.11% of bio-devices efficiency; 92.5 mA m-2 of current density and also 61% of NaCl transport. The profiles of surface devices have been detected by Scanning electron microscope (SEM) and Energy Dispersive X-ray spectroscopy (EDX). A several spherical shapes around 4 nm within alginate layer have been detected from SEM images and it was confirmed as yeast, meanwhile 5.04% of N has been found from EDX spectrum and was indicated from PNR. The results show that surface modification could be a promising method for bioelectricity generation which simultaneously produces electricity and seawater desalination and provides a green chemistry technology.