Workflow in open-source software for computed tomography analysis: technical note

Author(s):  
Francisco Samuel Rodrigues de Carvalho ◽  
Thiago Jonathan Silva dos Santos ◽  
Ivo Cavalcante Pita Neto ◽  
Eduardo Costa Studart Soares ◽  
Fábio Wildson Gurgel Costa
Author(s):  
Chia-An Wu ◽  
Andrew Squelch ◽  
Zhonghua Sun

Aim: To determine the optimal image segmentation protocol that minimizes the amount of manual intervention and correction required while extracting 3D model geometries suitable for 3D printing of aortic dissection (AD) using open-source software. Materials & methods: Computed tomography images of two type B AD cases were selected with images segmented using a 3D Slicer to create a hollow model containing the aortic wall and intimal tear. A workflow composed of filters, lumen extraction and outer surface creation was developed. Results & conclusion: The average difference in measurements at 14 anatomical locations between the Standard Tessellation Language file and the computed tomography image for cases 1 and 2 were 0.29 and 0.32 mm, respectively. The workflow for the image segmentation of type B AD was able to produce a high-accuracy 3D-printed model in a short time through open-source software.


2020 ◽  
Vol 9 (11) ◽  
pp. e1829119672
Author(s):  
Luiz Felipe Fernandes Gonçalves ◽  
Marcelo Augusto Oliveira de Sales ◽  
Yuri Barbosa Alves ◽  
Lucas Rodrigues Pinheiro

Objective: Development and validation (using open source software) of a method for volumetric and linear assessment of the nasopalatine channel (NPC) using cone beam computed tomography (CBCT). Materials and methods: This was an observational, cross-sectional study of 276 CBCTs. Acquisition was performed on a Prexion 3D computerized tomography scanner (manufacturer), using voxels of 0.08 mm and 0.14 mm, (with FOV at 5 and 12 cm). The images were compiled and divided in accordance with gender and the dental condition of the maxilla. Evaluation took place on a MacBook Pro computer using the Horos Project program (Version 3.3.5). Linear measurements and NPC volumetric evaluations were performed after correcting the orientation axes (sagittal and axial). The length and ROI volume tools were used. Results: The average age for men was 60.15 ± 11.94, for women it was 59.95 ± 10.63. Respectively, for men and women, the average NPC volume values ​​ were: 68.59 mm3 and 59.37 mm3 (p = 0.032), for length they were 10.08 mm and 8.84 mm (p = 0.000). Of the dentate participants, the NPC averages for volume for men and women were: 71.01 mm3 and 57.18 mm3 (p = 0.007), for length they were 10.26 mm and 9.14 mm (p = 0.001). In the edentulous, the average NPC lengths were 9.79 mm (men) and 8.37 mm (women) (p = 0.005). Conclusion: For linear and volumetric nasopalatine channel assessment, the post-processing method used in the Horos software was considered precise and easy-to-use.


Author(s):  
Passakorn PHANNACHITTA ◽  
Akinori IHARA ◽  
Pijak JIRAPIWONG ◽  
Masao OHIRA ◽  
Ken-ichi MATSUMOTO

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