Characteristics and implications of isoprenoid and hydroxy tetraether lipids in hadal sediments of Mariana and Yap Trenches

2020 ◽  
Vol 551 ◽  
pp. 119742
Author(s):  
Zhiyan Chen ◽  
Jiwei Li ◽  
Xinxin Li ◽  
Shun Chen ◽  
Shamik Dasgupta ◽  
...  
Keyword(s):  
2017 ◽  
Vol 159 ◽  
pp. 720-728 ◽  
Author(s):  
Gihan Mahmoud ◽  
Jarmila Jedelská ◽  
Boris Strehlow ◽  
Samia Omar ◽  
Marc Schneider ◽  
...  

2018 ◽  
Vol 115 (23) ◽  
pp. 6022-6027 ◽  
Author(s):  
Tiantian Yu ◽  
Weichao Wu ◽  
Wenyue Liang ◽  
Mark Alexander Lever ◽  
Kai-Uwe Hinrichs ◽  
...  

Members of the archaeal phylumBathyarchaeotaare among the most abundant microorganisms on Earth. Although versatile metabolic capabilities such as acetogenesis, methanogenesis, and fermentation have been suggested for bathyarchaeotal members, no direct confirmation of these metabolic functions has been achieved through growth ofBathyarchaeotain the laboratory. Here we demonstrate, on the basis of gene-copy numbers and probing of archaeal lipids, the growth ofBathyarchaeotasubgroup Bathy-8 in enrichments of estuarine sediments with the biopolymer lignin. Other organic substrates (casein, oleic acid, cellulose, and phenol) did not significantly stimulate growth ofBathyarchaeota. Meanwhile, putative bathyarchaeotal tetraether lipids incorporated13C from13C-bicarbonate only when added in concert with lignin. Our results are consistent with organoautotrophic growth of a bathyarchaeotal group with lignin as an energy source and bicarbonate as a carbon source and shed light into the cycling of one of Earth’s most abundant biopolymers in anoxic marine sediment.


Langmuir ◽  
1990 ◽  
Vol 6 (5) ◽  
pp. 1017-1023 ◽  
Author(s):  
J. L. Dote ◽  
W. R. Barger ◽  
F. Behroozi ◽  
E. L. Chang ◽  
S. L. Lo ◽  
...  

1993 ◽  
Vol 175 (4) ◽  
pp. 1191-1197 ◽  
Author(s):  
T J Beveridge ◽  
C G Choquet ◽  
G B Patel ◽  
G D Sprott

2019 ◽  
Vol 116 (45) ◽  
pp. 22505-22511 ◽  
Author(s):  
Zhirui Zeng ◽  
Xiao-Lei Liu ◽  
Kristen R. Farley ◽  
Jeremy H. Wei ◽  
William W. Metcalf ◽  
...  

Glycerol dibiphytanyl glycerol tetraethers (GDGTs) are distinctive archaeal membrane-spanning lipids with up to eight cyclopentane rings and/or one cyclohexane ring. The number of rings added to the GDGT core structure can vary as a function of environmental conditions, such as changes in growth temperature. This physiological response enables cyclic GDGTs preserved in sediments to be employed as proxies for reconstructing past global and regional temperatures and to provide fundamental insights into ancient climate variability. Yet, confidence in GDGT-based paleotemperature proxies is hindered by uncertainty concerning the archaeal communities contributing to GDGT pools in modern environments and ambiguity in the environmental and physiological factors that affect GDGT cyclization in extant archaea. To properly constrain these uncertainties, a comprehensive understanding of GDGT biosynthesis is required. Here, we identify 2 GDGT ring synthases, GrsA and GrsB, essential for GDGT ring formation in Sulfolobus acidocaldarius. Both proteins are radical S-adenosylmethionine proteins, indicating that GDGT cyclization occurs through a free radical mechanism. In addition, we demonstrate that GrsA introduces rings specifically at the C-7 position of the core GDGT lipid, while GrsB cyclizes at the C-3 position, suggesting that cyclization patterns are differentially controlled by 2 separate enzymes and potentially influenced by distinct environmental factors. Finally, phylogenetic analyses of the Grs proteins reveal that marine Thaumarchaeota, and not Euryarchaeota, are the dominant source of cyclized GDGTs in open ocean settings, addressing a major source of uncertainty in GDGT-based paleotemperature proxy applications.


2013 ◽  
Vol 65 ◽  
pp. 83-93 ◽  
Author(s):  
Sabine K. Lengger ◽  
Mariska Kraaij ◽  
Rik Tjallingii ◽  
Marianne Baas ◽  
Jan-Berend Stuut ◽  
...  

2011 ◽  
Vol 42 (1) ◽  
pp. 108-115 ◽  
Author(s):  
Huan Yang ◽  
Weihua Ding ◽  
Chuanlun L. Zhang ◽  
Xia Wu ◽  
Xiufeng Ma ◽  
...  
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