Generative adversarial networks in medical image segmentation: A review

Author(s):  
Siyi Xun ◽  
Dengwang Li ◽  
Hui Zhu ◽  
Min Chen ◽  
Jianbo Wang ◽  
...  
2020 ◽  
Author(s):  
Kun Chen ◽  
Manning Wang ◽  
Zhijian Song

Abstract Background: Deep neural networks have been widely used in medical image segmentation and have achieved state-of-the-art performance in many tasks. However, different from the segmentation of natural images or video frames, the manual segmentation of anatomical structures in medical images needs high expertise so the scale of labeled training data is very small, which is a major obstacle for the improvement of deep neural networks performance in medical image segmentation. Methods: In this paper, we proposed a new end-to-end generation-segmentation framework by integrating Generative Adversarial Networks (GAN) and a segmentation network and train them simultaneously. The novelty is that during the training of the GAN, the intermediate synthetic images generated by the generator of the GAN are used to pre-train the segmentation network. As the advances of the training of the GAN, the synthetic images evolve gradually from being very coarse to containing more realistic textures, and these images help train the segmentation network gradually. After the training of GAN, the segmentation network is then fine-tuned by training with the real labeled images. Results: We evaluated the proposed framework on four different datasets, including 2D cardiac dataset and lung dataset, 3D prostate dataset and liver dataset. Compared with original U-net and CE-Net, our framework can achieve better segmentation performance. Our framework also can get better segmentation results than U-net on small datasets. In addition, our framework is more effective than the usual data augmentation methods. Conclusions: The proposed framework can be used as a pre-train method of segmentation network, which helps to get a better segmentation result. Our method can solve the shortcomings of current data augmentation methods to some extent.


2021 ◽  
Vol 1 (1) ◽  
pp. 20-22
Author(s):  
Awadelrahman M. A. Ahmed ◽  
Leen A. M. Ali

This paper contributes in automating medical image segmentation by proposing generative adversarial network based models to segment both polyps and instruments in endoscopy images. A main contribution of this paper is providing explanations for the predictions using layer-wise relevance propagation approach, showing which pixels in the input image are more relevant to the predictions. The models achieved 0.46 and 0.70, on Jaccard index and 0.84 and 0.96 accuracy, on the polyp segmentation and the instrument segmentation, respectively.


2020 ◽  
Vol 10 (15) ◽  
pp. 5032
Author(s):  
Xiaochang Wu ◽  
Xiaolin Tian

Medical image segmentation is a classic challenging problem. The segmentation of parts of interest in cardiac medical images is a basic task for cardiac image diagnosis and guided surgery. The effectiveness of cardiac segmentation directly affects subsequent medical applications. Generative adversarial networks have achieved outstanding success in image segmentation compared with classic neural networks by solving the oversegmentation problem. Cardiac X-ray images are prone to weak edges, artifacts, etc. This paper proposes an adaptive generative adversarial network for cardiac segmentation to improve the segmentation rate of X-ray images by generative adversarial networks. The adaptive generative adversarial network consists of three parts: a feature extractor, a discriminator and a selector. In this method, multiple generators are trained in the feature extractor. The discriminator scores the features of different dimensions. The selector selects the appropriate features and adjusts the network for the next iteration. With the help of the discriminator, this method uses multinetwork joint feature extraction to achieve network adaptivity. This method allows features of multiple dimensions to be combined to perform joint training of the network to enhance its generalization ability. The results of cardiac segmentation experiments on X-ray chest radiographs show that this method has higher segmentation accuracy and less overfitting than other methods. In addition, the proposed network is more stable.


2019 ◽  
Vol 31 (6) ◽  
pp. 1007 ◽  
Author(s):  
Haiou Wang ◽  
Hui Liu ◽  
Qiang Guo ◽  
Kai Deng ◽  
Caiming Zhang

Electronics ◽  
2021 ◽  
Vol 10 (3) ◽  
pp. 348
Author(s):  
Choongsang Cho ◽  
Young Han Lee ◽  
Jongyoul Park ◽  
Sangkeun Lee

Semantic image segmentation has a wide range of applications. When it comes to medical image segmentation, its accuracy is even more important than those of other areas because the performance gives useful information directly applicable to disease diagnosis, surgical planning, and history monitoring. The state-of-the-art models in medical image segmentation are variants of encoder-decoder architecture, which is called U-Net. To effectively reflect the spatial features in feature maps in encoder-decoder architecture, we propose a spatially adaptive weighting scheme for medical image segmentation. Specifically, the spatial feature is estimated from the feature maps, and the learned weighting parameters are obtained from the computed map, since segmentation results are predicted from the feature map through a convolutional layer. Especially in the proposed networks, the convolutional block for extracting the feature map is replaced with the widely used convolutional frameworks: VGG, ResNet, and Bottleneck Resent structures. In addition, a bilinear up-sampling method replaces the up-convolutional layer to increase the resolution of the feature map. For the performance evaluation of the proposed architecture, we used three data sets covering different medical imaging modalities. Experimental results show that the network with the proposed self-spatial adaptive weighting block based on the ResNet framework gave the highest IoU and DICE scores in the three tasks compared to other methods. In particular, the segmentation network combining the proposed self-spatially adaptive block and ResNet framework recorded the highest 3.01% and 2.89% improvements in IoU and DICE scores, respectively, in the Nerve data set. Therefore, we believe that the proposed scheme can be a useful tool for image segmentation tasks based on the encoder-decoder architecture.


2021 ◽  
Author(s):  
Dachuan Shi ◽  
Ruiyang Liu ◽  
Linmi Tao ◽  
Zuoxiang He ◽  
Li Huo

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