The African turquoise killifish Nothobranchius furzeri as a model for aging research

2018 ◽  
Vol 27 ◽  
pp. 15-22
Author(s):  
Hanna Reuter ◽  
Johannes Krug ◽  
Peter Singer ◽  
Christoph Englert
2017 ◽  
Author(s):  
Mario Baumgart ◽  
Emanuel Barth ◽  
Aurora Savino ◽  
Marco Groth ◽  
Philipp Koch ◽  
...  

ABSTRACTBackground: The short-lived fish Nothobranchius furzeri is the shortest-lived vertebrate that can be cultured in captivity and was recently established as a model organism for aging research. Small non-coding RNAs, especially miRNAs, are implicated in age-dependent control of gene expression.Results: Here, we present a comprehensive catalogue of miRNAs and several other non-coding RNA classes (ncRNAs) for Nothobranchius furzeri. Analyzing multiple small RNA-Seq libraries, we show most of these identified miRNAs are expressed in at least one of seven Nothobranchius species. Additionally, duplication and clustering of N. furzeri miRNAs was analyzed and compared to the four fish species Danio rerio, Oryzias latipes, Gasterosteus aculeatus and Takifugu rubripes. A peculiar characteristic of N. furzeri as compared to other teleosts was a duplication of the miR-29 cluster.Conclusion: The completeness of the catalogue we provide is comparable to that of zebrafish. This catalogue represents a basis to investigate the role of miRNAs in aging and development in this species.Availability: All supplementary material can be found online at http://www.rna.uni-jena.de/en/supplements/nothobranchius-furzeri-mirnome/.


2014 ◽  
Vol 196 (4) ◽  
pp. 183-191 ◽  
Author(s):  
L. D’Angelo ◽  
L. Castaldo ◽  
A. Cellerino ◽  
P. de Girolamo ◽  
C. Lucini

2019 ◽  
Vol 9 (1) ◽  
pp. 103 ◽  
Author(s):  
Alessia Montesano ◽  
Elena De Felice ◽  
Adele Leggieri ◽  
Antonio Palladino ◽  
Carla Lucini ◽  
...  

Nesfatin-1 (Nesf-1) was identified as an anorexigenic and well conserved molecule in rodents and fish. While tissue distribution of NUCB2 (Nucleobindin 2)/Nesf-1 is discretely known in vertebrates, reports on ontogenetic expression are scarce. Here, we examine the age-related central and peripheral expression of NUCB2/Nesf-1 in the teleost African turquoise killifish Nothobranchius furzeri, a consolidated model organism for aging research. We focused our analysis on brain areas responsible for the regulation of food intake and the rostral intestinal bulb, which is analogous of the mammalian stomach. We hypothesize that in our model, the stomach equivalent structure is the main source of NUCB2 mRNA, displaying higher expression levels than those observed in the brain, mainly during aging. Remarkably, its expression significantly increased in the rostral intestinal bulb compared to the brain, which is likely due to the typical anorexia of aging. When analyzing the pattern of expression, we confirmed the distribution in diencephalic areas involved in food intake regulation at all age stages. Interestingly, in the rostral bulb, NUCB2 mRNA was localized in the lining epithelium of young and old animals, while Nesf-1 immunoreactive cells were distributed in the submucosae. Taken together, our results represent a useful basis for gaining deeper knowledge regarding the mechanisms that regulate food intake during vertebrate aging.


2016 ◽  
Vol 32 (9) ◽  
pp. 543-552 ◽  
Author(s):  
Matthias Platzer ◽  
Christoph Englert

2009 ◽  
Vol 10 (2) ◽  
pp. R16 ◽  
Author(s):  
Kathrin Reichwald ◽  
Chris Lauber ◽  
Indrajit Nanda ◽  
Jeanette Kirschner ◽  
Nils Hartmann ◽  
...  

2020 ◽  
Vol 4 (Supplement_1) ◽  
pp. 743-743
Author(s):  
Anne Brunet

Abstract We have pioneered a new model organism for aging research, the naturally short-lived African killifish Nothobranchius furzeri. The African killifish lives in ephemeral pools of water in Africa, and has evolved a short life cycle adapted to this habitat. Its embryos can also resist drought until the next wet season in a state of ‘suspended life’. In laboratory conditions, the African killifish has a maximal lifespan of about 4-6 months, and is, so far, the shortest-lived vertebrate that can be bred in captivity. We have successfully transformed this natural short-lived vertebrate into a usable model organism for aging research, including de novo assembly of the genome and CRISPR-Cas9 mediated genome-editing. Our goal is to use this model to discover new principles underlying aging, longevity, and ‘suspended animation’ in vertebrates.


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