Genome-wide investigation of bHLH genes and expression analysis under different biotic and abiotic stresses in Helianthus annuus L.

2021 ◽  
Author(s):  
Juanjuan Li ◽  
Xin Li ◽  
Peng Han ◽  
Hui Liu ◽  
Jianchuan Gong ◽  
...  
Keyword(s):  
Helianthus Annuus ◽  
Expression Analysis ◽  
Abiotic Stresses ◽  
Biotic And Abiotic Stresses ◽  
Helianthus Annuus L ◽  
Genome Wide ◽  
Bhlh Genes

Identification and expression analysis of WRKY family genes under biotic and abiotic stresses in Brassica rapa

2014 ◽  
Vol 290 (1) ◽  
pp. 79-95 ◽  
Author(s):  
Md. Abdul Kayum ◽  
Hee-Jeong Jung ◽  
Jong-In Park ◽  
Nasar Uddin Ahmed ◽  
Gopal Saha ◽  
...  
Keyword(s):  
Brassica Rapa ◽  
Expression Analysis ◽  
Abiotic Stresses ◽  
Biotic And Abiotic Stresses

scholarly journals Genome-Wide Identification, Expression Analysis, and Subcellular Localization of Carthamus tinctorius bHLH Transcription Factors

2019 ◽  
Vol 20 (12) ◽  
pp. 3044 ◽  
Author(s):  
Yingqi Hong ◽  
Naveed Ahmad ◽  
Yuanyuan Tian ◽  
Jianyu Liu ◽  
Liyan Wang ◽  
...  
Keyword(s):  
Transcription Factors ◽  
Subcellular Localization ◽  
Expression Analysis ◽  
Interaction Network ◽  
Carthamus Tinctorius ◽  
Protein Motifs ◽  
Quantitative Expression ◽  
Helix Loop Helix ◽  
Genome Wide ◽  
Bhlh Genes

The basic helix–loop–helix (bHLH) family is the second largest superfamily of transcription factors that belongs to all three eukaryotic kingdoms. The key function of this superfamily is the regulation of growth and developmental mechanisms in plants. However, the bHLH gene family in Carthamus tinctorius has not yet been studied. Here, we identified 41 bHLH genes in Carthamus tinctorius that were classified into 23 subgroups. Further, we conducted a phylogenetic analysis and identified 10 conserved protein motifs found in the safflower bHLH family. We comprehensively analyzed a group of bHLH genes that could be associated with flavonoid biosynthesis in safflower by gene expression analysis, gene ontology annotation, protein interaction network prediction, subcellular localization of the candidate CtbHLH40 gene, and real-time quantitative expression analysis. This study provides genome-wide identification of the genes related to biochemical and physiological processes in safflower.

Genome-wide identification, expression analysis of auxin-responsive GH3 family genes in maize (Zea mays L.) under abiotic stresses

2015 ◽  
Vol 57 (9) ◽  
pp. 783-795 ◽  
Author(s):  
Shangguo Feng ◽  
Runqing Yue ◽  
Sun Tao ◽  
Yanjun Yang ◽  
Lei Zhang ◽  
...  
Keyword(s):  
Zea Mays ◽  
Expression Analysis ◽  
Abiotic Stresses ◽  
Zea Mays L ◽  
Genome Wide
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