A comparative phenotypic and genomic analysis of Clostridium beijerinckii mutant with enhanced solvent production

2021 ◽  
Vol 329 ◽  
pp. 49-55
Author(s):  
Seung-Oh Seo ◽  
Ting Lu ◽  
Yong-Su Jin ◽  
Hans P. Blaschek
2013 ◽  
Vol 79 (19) ◽  
pp. 5853-5863 ◽  
Author(s):  
Yi Wang ◽  
Xiangzhen Li ◽  
Caroline B. Milne ◽  
Holger Janssen ◽  
Weiyin Lin ◽  
...  

ABSTRACTClostridium beijerinckiiis a well-known solvent-producing microorganism with great potential for biofuel and biochemical production. To better understand and improve the biochemical pathway to solvents, the development of genetic tools for engineeringC. beijerinckiiis highly desired. Based on mobile group II intron technology, a targetron gene knockout system was developed forC. beijerinckiiin this study. This system was successfully employed to disrupt acid production pathways inC. beijerinckii, leading topta(encoding phosphotransacetylase)- andbuk(encoding butyrate kinase)-negative mutants. In addition to experimental characterization, the mutant phenotypes were analyzed in the context of ourC. beijerinckiigenome-scale model. Compared to those of the parental strain (C. beijerinckii8052), acetate production in theptamutant was substantially reduced and butyrate production was remarkably increased, while solvent production was dependent on the growth medium. Theptamutant also produced much higher levels of lactate, suggesting that disruptingptainfluenced the energy generation and electron flow pathways. In contrast, acetate and butyrate production in thebukmutant was generally similar to that of the wild type, but solvent production was consistently 20 to 30% higher and glucose consumption was more rapid and complete. Our results suggest that the acid and solvent production ofC. beijerinckiican be effectively altered by disrupting the acid production pathways. As the gene disruption method developed in this study does not leave any antibiotic marker in a disrupted allele, multiple and high-throughput gene disruption is feasible for elucidating genotype and phenotype relationships inC. beijerinckii.


2001 ◽  
Vol 67 (11) ◽  
pp. 5127-5133 ◽  
Author(s):  
Ana M. López-Contreras ◽  
Hauke Smidt ◽  
John van der Oost ◽  
Pieternel A. M. Claassen ◽  
Hans Mooibroek ◽  
...  

ABSTRACT Growth and the production of acetone, butanol, and ethanol byClostridium beijerinckii NCIMB 8052 on several polysaccharides and sugars were analyzed. On crystalline cellulose, growth and solvent production were observed only when a mixture of fungal cellulases was added to the medium. On lichenan growth and solvent production occurred, but this polymer was only partially utilized. To increase utilization of these polymers and subsequent solvent production, the genes for two new glycoside hydrolases, celA and celD from the fungus Neocallimastix patriciarum, were cloned separately into C. beijerinckii. To do this, a secretion vector based on the pMTL500E shuttle vector and containing the promoter and signal sequence coding region of the Clostridium saccharobutylicum NCP262 eglA gene was constructed and fused either to the celA gene or thecelD gene. Stable C. beijerinckiitransformants were obtained with the resulting plasmids, pWUR3 (celA) and pWUR4 (celD). The recombinant strains showed clear halos on agar plates containing carboxymethyl cellulose upon staining with Congo red. In addition, their culture supernatants had significant endoglucanase activities (123 U/mg of protein for transformants harboring celA and 78 U/mg of protein for transformants harboring celD). AlthoughC. beijerinckii harboring either celA orcelD was not able to grow, separately or in mixed culture, on carboxymethyl cellulose or microcrystalline cellulose, both transformants showed a significant increase in solvent production during growth on lichenan and more extensive degradation of this polymer than that exhibited by the wild-type strain.


2012 ◽  
Vol 14 (5) ◽  
pp. 569-578 ◽  
Author(s):  
Han Xiao ◽  
Zhilin Li ◽  
Yu Jiang ◽  
Yunliu Yang ◽  
Weihong Jiang ◽  
...  

1998 ◽  
Vol 64 (5) ◽  
pp. 1780-1785 ◽  
Author(s):  
Victoria J. Evans ◽  
Hemachandra Liyanage ◽  
Adriana Ravagnani ◽  
Michael Young ◽  
Eva R. Kashket

ABSTRACT The wild-type strain of Clostridium beijerinckii NCIMB 8052 tends to degenerate (i.e., lose the ability to form solvents) after prolonged periods of laboratory culture. Several Tn1545 mutants of this organism showing enhanced long-term stability of solvent production were isolated. Four of them harbor identical insertions within the fms (def) gene, which encodes peptide deformylase (PDF). The C. beijerinckii fms gene product contains four diagnostic residues involved in the Zn2+ coordination and catalysis found in all PDFs, but it is unusually small, because it lacks the dispensable disordered C-terminal domain. Unlike previously characterized PDFs fromEscherichia coli and Thermus thermophilus, theC. beijerinckii PDF can apparently tolerate N-terminal truncation. The Tn1545 insertion in the mutants is at a site corresponding to residue 15 of the predicted gene product. This probably removes 23 N-terminal residues from PDF, leaving a 116-residue protein. The mutant PDF retains at least partial function, and it complements an fms(Ts) strain of E. coli. Northern hybridizations indicate that the mutant gene is actively transcribed in C. beijerinckii. This can only occur from a previously unsuspected, outwardly directed promoter located close to the right end of Tn1545. The Tn1545 insertion in fms causes a reduction in the growth rate of C. beijerinckii, and, associated with this, the bacteria display an enhanced stability of solvent production. The latter phenotype can be mimicked in the wild type by reducing the growth rate. Therefore, the observed amelioration of degeneration in the mutants is probably due to their reduced growth rates.


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