Unravelling the genetic diversity and relatedness of Echinococcus multilocularis isolates in Eurasia using the EmsB microsatellite nuclear marker

2021 ◽  
pp. 104863
Author(s):  
Gérald Umhang ◽  
Vanessa Bastid ◽  
Hamza Avcioglu ◽  
Guna Bagrade ◽  
Miljenko Bujanić ◽  
...  
2009 ◽  
Vol 3 (6) ◽  
pp. e452 ◽  
Author(s):  
Jenny Knapp ◽  
Jean-Mathieu Bart ◽  
Patrick Giraudoux ◽  
Marie-Louise Glowatzki ◽  
Isabelle Breyer ◽  
...  

2012 ◽  
Vol 42 (12) ◽  
pp. 2142-2152 ◽  
Author(s):  
Svetlana A. Semerikova ◽  
Martin Lascoux ◽  
Vladimir L. Semerikov

The genus Abies is one of the largest conifer genera and many of the marginal species remain poorly characterized. Abies semenovii B. Fedtsch. is a rare mountain fir species from central Asia, and its species status is still disputed. We used both nuclear (allozymes and AFLP) and chloroplastic (cpSSR) markers to show that A. semenovii deserves to be considered as a species and that its low genetic diversity justifies more a proactive conservation policy. First, A. semenovii was significantly differentiated from the Siberian fir Abies sibirica Ledeb. and we did not detect gene flow between the two species. Second, A. semenovii has a very low nuclear genetic diversity, suggesting a prolonged restricted effective population size. Abies semenovii had low cpSSR diversity too but the identification of seven closely related haplotypes suggests that these mutations accumulated recently during a phase of population expansion. This agrees well with the palynological record and is in contrast with the situation observed in another rare Eurasian fir endemic to Kamchatka, Abies gracilis Kom., which was devoid of variation in cpSSRs but that also had a more substantial nuclear marker diversity than A. semenovii, thereby suggesting a more recent but less severe population bottleneck.


2010 ◽  
Vol 174 (3-4) ◽  
pp. 241-246 ◽  
Author(s):  
A. Casulli ◽  
Z. Széll ◽  
E. Pozio ◽  
T. Sréter

2021 ◽  
pp. 109429
Author(s):  
Jenny Knapp ◽  
Anika Meyer ◽  
Sandra Courquet ◽  
Laurence Millon ◽  
Francis Raoul ◽  
...  

2006 ◽  
Vol 6 (5) ◽  
pp. 390-400 ◽  
Author(s):  
J.M. Bart ◽  
J. Knapp ◽  
B. Gottstein ◽  
F. El-Garch ◽  
P. Giraudoux ◽  
...  

2018 ◽  
Vol 262 ◽  
pp. 30-41 ◽  
Author(s):  
Adel Spotin ◽  
Belgees Boufana ◽  
Ehsan Ahmadpour ◽  
Adriano Casulli ◽  
Mahmoud Mahami-Oskouei ◽  
...  

2019 ◽  
Vol 14 ◽  
pp. e00045 ◽  
Author(s):  
Jenny Knapp ◽  
Gérald Umhang ◽  
Helene Wahlström ◽  
Mohammad Nafi Solaiman Al-Sabi ◽  
Erik O. Ågren ◽  
...  

2019 ◽  
Vol 3 (6) ◽  
Author(s):  
Michael S Caterino ◽  
Shelley S Langton-Myers

Abstract The southern Appalachian Mountains in eastern North America host exceptional diversity, a substantial proportion of which has been generated in place. Yet, beyond broad generalities, bio- and phylogeographical patterns, and the temporal scale of diversification in the region are poorly resolved. Using one mitochondrial and one nuclear marker, we analyze intraspecific diversity patterns in a flightless, litter-inhabiting rove beetle Dasycerus carolinensis Horn. Our goals were to reconstruct the phylogeographical history of this species, producing a dated intraspecific phylogeny, and to examine previous hypotheses of possible cryptic divergence across populations of the species. Samples derive from a mix of old-growth fragments and secondary growth forests, and we also ask whether old-growth remnants host a larger proportion of genetic diversity in the species. We recover a strong primary subdivision among major lineages across the French Broad River basin (dated to ~5.8 MYBP), and a secondary subdivision among western populations dating to ~4.5 MYBP. Most interpopulation uncorrected divergences exceed 5%, strongly suggesting cryptic differentiation. Old-growth populations do not show greater genetic diversity than secondary-growth populations, indicating that most populations have persisted through recent anthropogenic disturbance.


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