scholarly journals Spectroscopic investigations and molecular docking study of (2E)-1-(4-Chlorophenyl)-3-[4-(propan-2-yl)phenyl]prop-2-en-1-one using quantum chemical calculations

2016 ◽  
Vol 1120 ◽  
pp. 317-326 ◽  
Author(s):  
Shana Parveen ◽  
Monirah A. Al-Alshaikh ◽  
C. Yohannan Panicker ◽  
Ali A. El-Emam ◽  
Vinutha V. Salian ◽  
...  
2018 ◽  
Vol 11 (3) ◽  
pp. 72 ◽  
Author(s):  
Mayara Teles Fujishima ◽  
Nayara Silva ◽  
Ryan Ramos ◽  
Elenilze Batista Ferreira ◽  
Kelton Santos ◽  
...  

Reactive oxygen species (ROS) are continuously generated in the normal biological systems, primarily by enzymes as xanthine oxidase (XO). The inappropriate scavenging or inhibition of ROS has been considered to be linked with aging, inflammatory disorders, and chronic diseases. Therefore, many plants and their products have been investigated as natural antioxidants for their potential use in preventive medicine. The leaves and bark extracts of Curatella americana Linn. were described in scientific research as anti-inflammatory, vasodilator, anti-ulcerogenic, and hypolipidemic effects. So, the aim of this study was to evaluate the antioxidant potentials of leaf hydroalcoholic extract from C. americana (HECA) through the scavenging DPPH assay and their main chemical constituents, evaluated by the following quantum chemical approaches (DFT B3LYP/6-31G**): Maps of Molecular Electrostatic Potential (MEP), Frontier Orbital’s (HOMO and LUMO) followed by multivariate analysis and molecular docking simulations with the xanthine oxidase enzyme. The hydroalcoholic extract showed significant antioxidant activity by free radical scavenging probably due to the great presence of flavonoids, which were grouped in the PCA and HCA analysis with the standard gallic acid. In the molecular docking study, the compounds studied presented the binding free energy (ΔG) values close each other, due to the similar interactions with amino acids residues at the activity site. The descriptors Gap and softness were important to characterize the molecules with antioxidant potential by capturing oxygen radicals.


Processes ◽  
2020 ◽  
Vol 8 (11) ◽  
pp. 1393
Author(s):  
Mayra Cristina Martínez-Ceniceros ◽  
Linda-Lucila Landeros-Martínez ◽  
Nora-Aydeé Sánchez-Bojorge ◽  
Fabiola Sandoval-Salas ◽  
Hilda Amelia Piñón-Castillo ◽  
...  

Castor bean (Ricinus Communis) oil has been reported as one of the most important bio-based fuels; however, high amounts of toxic solid residue are generated in the production. This toxicity is due to several molecules, ricin protein being the most studied compound. The inhibition of the ricin protein is essential for eliminating its toxicity. The objective of this study is to predict the possible inhibition process via the interactions between the ricin protein and the flavonoids quercetin (Q) and epigallocatechin gallate (EGCG). The molecular structures of the complexes formed between the ricin protein and flavonoids were studied using quantum-chemical and molecular docking calculations to analyze the type of interaction, active site of the protein, binding energies, and different conformations in the inhibition process. Different methodologies were applied for the molecular structure determination; the best approximation was obtained with B3LYP/6-31G (d,p) theoretical methodology. Mappings of electrostatic potential (MEP) and frontier molecular orbitals were used for the identification of the probable sites of interaction, which were confirmed by molecular docking. The adjustment and alignment of flavonoid groups before and after the interaction, and charge transfer parameters, showed that Q and EGCG act as electron donors inside of the active site in ricin.


2016 ◽  
Vol 1109 ◽  
pp. 131-138 ◽  
Author(s):  
Monirah A. Al-Alshaikh ◽  
Sheena Mary Y ◽  
C. Yohannan Panicker ◽  
Mohamed I. Attia ◽  
Ali A. El-Emam ◽  
...  

RSC Advances ◽  
2015 ◽  
Vol 5 (96) ◽  
pp. 79107-79118 ◽  
Author(s):  
Somnath Dasmandal ◽  
Arjama Kundu ◽  
Suparna Rudra ◽  
Ambikesh Mahapatra

Exploration of binding interaction between anionic amino acid surfactant and BSA.


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