Spatial patterns and co-occurrence networks of microbial communities related to environmental heterogeneity in deep-sea surface sediments around Yap Trench, Western Pacific Ocean

Two new species of marine nematodes, Paramphimonhystrella longispicula sp. n. in the deep-sea sediments from the Philippine Sea in the tropical Western Pacific Ocean with the water depth of 3920–5176 m and P. eurystoma sp. n. in the shelf seafloor from the East China Sea with the water depth of 55–64 m, are described. Both species possess long and slender spicules, which are present only in the congener P. barbula, a species discovered from the continental slope of New Zealand. Paramphimonhystrella longispicula sp. n. can be easily distinguished from P. barbula by the relatively broader buccal cavity, the unequally long cervical setae and a higher number of terminal setae. Paramphimonhystrella eurystoma sp. n. is unique in having a peculiar gubernaculum with two proximal capitula and a peculiar hammer-shaped cuticularized piece posterior to vulva, by which it can be distinguished from P. longispicula sp. n. and P. barbula as well as other congeners. Paramphimonhystrella longispicula sp. n. differs from P. eurystoma sp. n. also by the number of terminal setae (4 vs. 2). A dichotomous key to nine valid species of Paramphimonhystrella is provided.

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Brevibacterium profundi sp. nov., isolated from deep-sea sediment of the Western Pacific Ocean

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY ◽

10.1099/ijsem.0.004483 ◽

2020 ◽

Vol 70 (11) ◽

pp. 5818-5823 ◽

Cited By ~ 4

Author(s):

Shengxiang Pei ◽

Fuquan Xie ◽

Siwen Niu ◽

Lingqi Ma ◽

Rui Zhang ◽

...

Keyword(s):

Pacific Ocean ◽

Deep Sea ◽

Western Pacific ◽

Diaminopimelic Acid ◽

Rrna Gene ◽

Western Pacific Ocean ◽

Content Type ◽

Deep Sea Sediment ◽

Link Type ◽

The Western Pacific

A new Gram-stain-positive, aerobic, non-motile and rod-shaped actinobacterium, designated O1T, was isolated from a deep-sea sediment of the Western Pacific Ocean. Strain O1T showed optimal growth at 30 °C, between pH 6.0 and 8.0, and in the presence of 1–5 % (w/v) NaCl. The predominant menaquinone was MK-8 (H2), and anteiso-C15 : 0 and anteiso-C17 : 0 were the major fatty acids. The diagnostic diamino acid in the cell-wall peptidoglycan was meso-diaminopimelic acid. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol and one unknown glycolipid. The DNA G+C content of strain O1T was 64.9 mol% and the genome size was 4.17 Mb. Based on a similarity search and phylogenetic analysis of the 16S rRNA gene sequence, strain O1T belonged to the genus Brevibacterium . The values of average nucleotide identity and in silico DNA–DNA hybridization between strain O1T and its close relatives were well below the thresholds used for the delineation of a new species. On the basis of the morphological and chemotaxonomic characteristics, as well as the genotypic data, it is proposed that strain O1T represents a novel species of the genus Brevibacterium , for which the name Brevibacterium profundi sp. nov. is proposed. The type strain is O1T (=JCM 33845T=MCCC 1A16744T).

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