Sulfonium ylide formation and subsequent C S bond cleavage of aromatic isopropyl sulfide catalyzed by hemin in aqueous solvent

We report selective formation of heterobimetallic PtII/CuI complexes that demonstrate how facile bond activation processes can be achieved by altering reactivity of common organoplatinum compounds through their interaction with another metal center. The interaction of the Cu center with Pt center and with a Pt-bound alkyl group increases the stability of PtMe2 towards undesired rollover cyclometalation. The presence of the CuI center also enables facile transmetalation from electron-deficient tetraarylborate [B(ArF)4]- anion and mild C-H bond cleavage of a terminal alkyne, which was not observed in the absence of an electrophilic Cu center. The DFT study indicates that the role of Cu center acts as a binding site for alkyne substrate, while activating its terminal C-H bond.

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Room Temperature Alkali Metal Reduction of Carbon Dioxide

10.26434/chemrxiv.12665336 ◽

2020 ◽

Author(s):

Lucas A. Freeman ◽

Akachukwu D. Obi ◽

Haleigh R. Machost ◽

Andrew Molino ◽

Asa W. Nichols ◽

...

Keyword(s):

Alkali Metal ◽

Alkali Metals ◽

Room Temperature ◽

Chemical Reduction ◽

Bond Cleavage ◽

Open Shell ◽

Metal Reduction ◽

One Pot ◽

Earth Abundant ◽

Electron Reduction

The reduction of the relatively inert carbon–oxygen bonds of CO2 to access useful CO2-derived organic products is one of the most important fundamental challenges in synthetic chemistry. Facilitating this bond-cleavage using earth-abundant, non-toxic main group elements (MGEs) is especially arduous because of the difficulty in achieving strong inner-sphere interactions between CO2 and the MGE. Herein we report the first successful chemical reduction of CO2 at room temperature by alkali metals, promoted by a cyclic(alkyl)(amino) carbene (CAAC). One-electron reduction of CAAC-CO2 adduct (1) with lithium, sodium or potassium metal yields stable monoanionic radicals clusters [M(CAAC–CO2)]n(M = Li, Na, K, 2-4) and two-electron alkali metal reduction affords open-shell, dianionic clusters of the general formula [M2(CAAC–CO2)]n (5-8). It is notable that these crystalline clusters of reduced CO2 may also be isolated via the “one-pot” reaction of free CO2 with free CAAC followed by the addition of alkali metals – a reductive process which does not occur in the absence of carbene. Each of the products 2-8 were investigated using a combination of experimental and theoretical methods.

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Oxygen-Oxygen Bond Cleavage and Formation in Co(II) Mediated Stoichiometric O2 Reduction via the Potential Intermediacy of a Co(IV) Oxyl Radical

10.26434/chemrxiv.7176392 ◽

2018 ◽

Author(s):

Lucie Nurdin ◽

Denis M. Spasyuk ◽

Laura Fairburn ◽

Warren Piers ◽

Laurent Maron

Keyword(s):

Bond Cleavage ◽

Peroxo Complex ◽

Oxygen Oxygen ◽

O2 Reduction ◽

Oxygen Bond ◽

Pentadentate Ligand

Diprotonation of a remarkably stable, toluene soluble cobalt peroxo complex supported by a neutral, dianionic pentadentate ligand leads to facile O-O bond cleavage and production of a highly reactive Co(IV) oxyl cation intermediate that dimerizes and releases O2. These processes are relevant to both O2 reduction and O2 evolution and the mechanism was probed in detail both experimentally and computationally.

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Electron Donation by Low-Crystalline Ba-La-Ce Oxygen-Deficient Composite Oxide Accumulating on Ru Nanoparticles for Ammonia Synthesis under Mild Conditions

10.26434/chemrxiv.7763657.v1 ◽

2019 ◽

Author(s):

Katsutoshi Sato ◽

Shin-ichiro Miyahara ◽

Yuta Ogura ◽

Kotoko Tsujimaru ◽

Yuichiro Wada ◽

...

Keyword(s):

Ammonia Synthesis ◽

Bond Cleavage ◽

Synthesis Process ◽

Strong Electron ◽

Mild Conditions ◽

Ru Nanoparticles ◽

Rate Determining Step ◽

Highly Active ◽

Composite Oxides ◽

Low Crystalline

To mitigate global problems related to energy and global warming, it is helpful to develop an ammonia synthesis process using catalysts that are highly active under mild conditions. Here we show that the ammonia synthesis activity of Ru/Ba/LaCeOx pre-reduced at 700 °C is the highest reported among oxide-supported Ru catalysts. Our results indicate that low crystalline oxygen-deficient composite oxides, which include Ba2+, Ce3+ and La3+, with strong electron-donating ability, accumulate on Ru particles and thus promote N≡N bond cleavage, which is the rate determining step for ammonia synthesis.

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Electron Donation by Low-Crystalline Ba-La-Ce Oxygen-Deficient Composite Oxide Accumulating on Ru Nanoparticles for Ammonia Synthesis under Mild Conditions

10.26434/chemrxiv.7763657 ◽

2019 ◽

Author(s):

Katsutoshi Sato ◽

Shin-ichiro Miyahara ◽

Yuta Ogura ◽

Kotoko Tsujimaru ◽

Yuichiro Wada ◽

...

Keyword(s):

Ammonia Synthesis ◽

Bond Cleavage ◽

Synthesis Process ◽

Strong Electron ◽

Mild Conditions ◽

Ru Nanoparticles ◽

Rate Determining Step ◽

Highly Active ◽

Composite Oxides ◽

Low Crystalline

To mitigate global problems related to energy and global warming, it is helpful to develop an ammonia synthesis process using catalysts that are highly active under mild conditions. Here we show that the ammonia synthesis activity of Ru/Ba/LaCeOx pre-reduced at 700 °C is the highest reported among oxide-supported Ru catalysts. Our results indicate that low crystalline oxygen-deficient composite oxides, which include Ba2+, Ce3+ and La3+, with strong electron-donating ability, accumulate on Ru particles and thus promote N≡N bond cleavage, which is the rate determining step for ammonia synthesis.

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Mechanisms of ATP to cAMP Conversion Catalyzed by the Mammalian Adenylyl Cyclase: A Role of Magnesium Coordination Shells and Proton Wires

10.26434/chemrxiv.9209180 ◽

2019 ◽

Author(s):

Bella Grigorenko ◽

Igor Polyakov ◽

Alexander Nemukhin

Keyword(s):

Adenylyl Cyclase ◽

Bond Cleavage ◽

Cyclic Adenosine Monophosphate ◽

Adenosine Monophosphate ◽

Md Simulations ◽

Coordination Shell ◽

Energy Profile ◽

One Step ◽

Type V

We report a mechanism of adenosine triphosphate (ATP) to cyclic adenosine monophosphate (cAMP) conversion by the mammalian type V adenylyl cyclase revealed in molecular dynamics (MD) and quantum mechanics/molecular mechanics (QM/MM) simulations. We characterize a set of computationally derived enzyme-substrate (ES) structures showing an important role of coordination shells of magnesium ions in the solvent accessible active site. Several stable six-fold coordination shells of MgA2+ are observed in MD simulations of ES complexes. In the lowest energy ES conformation, the coordination shell of MgA2+ does not include the Oδ1 atom of the conserved Asp440 residue. Starting from this conformation, a one-step reaction mechanism is characterized which includes proton transfer from the ribose O3'H3' group in ATP to Asp440 via a shuttling water molecule and PA-O3A bond cleavage and O3'-PA bond formation. The energy profile of this route is consistent with the observed reaction kinetics. In a higher energy ES conformation, MgA2+ is bound to the Oδ1(Asp440) atom as suggested in the relevant crystal structure of the protein with a substrate analog. The computed energy profile initiated by this ES is characterized by higher energy expenses to complete the reaction. Consistently with experimental data, we show that the Asp440Ala mutant of the enzyme should exhibit a reduced but retained activity. All considered reaction pathways include proton wires from the O3'H3' group via shuttling water molecules.

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Recent Developments in the Asymmetric Detrifluoroacetylative Reactions of in situ Generated Mono-Fluorinated Enolates

Current Organic Chemistry ◽

10.2174/1385272824999200801022712 ◽

2020 ◽

Vol 24 (18) ◽

pp. 2181-2191

Author(s):

Li Wang ◽

Ziyi Li ◽

Jiang Liu ◽

Jianlin Han ◽

Hiroki Moriwaki ◽

...

Keyword(s):

Organic Chemistry ◽

Bond Cleavage ◽

Synthetic Methodology ◽

Research Topics ◽

Synthetic Organic Chemistry ◽

Nucleophilic Reactions ◽

F Center ◽

Recent Developments

The development of an efficient and mild synthetic methodology for the construction of bioactive fluorine-containing molecules represents one of the hot research topics in general synthetic organic chemistry. In this review, some recent progresses achieved in the development of detrifluoroacetylatively generated mono-fluorinated enolates via CC bond cleavage and their asymmetric nucleophilic reactions for assembly of chiral quaternary C-F center containing compounds.

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Quantitative Structure-activity Relationship Analysis for Predicting Lipophilicity of Aniline Derivatives (Including some Pharmaceutical Compounds)

Combinatorial Chemistry & High Throughput Screening ◽

10.2174/1386207322666190419111559 ◽

2019 ◽

Vol 22 (5) ◽

pp. 333-345

Author(s):

Morteza Rezaei ◽

Esmat Mohammadinasab ◽

Tahere Momeni Esfahani

Keyword(s):

Density Functional ◽

Pharmaceutical Compounds ◽

Partial Least Square ◽

Least Square ◽

Basis Set ◽

Van Der Waals Volume ◽

Relationship Analysis ◽

Aniline Derivatives ◽

Aqueous Solvent ◽

Qsar Models

Background: In this study, we used a hierarchical approach to develop quantitative structureactivity relationship (QSAR) models for modeling lipophilicity of a set of 81 aniline derivatives containing some pharmaceutical compounds. Objective: The multiple linear regression (MLR), principal component regression (PCR) and partial least square regression (PLSR) methods were utilized to construct QSAR models. Materials & Methods: Quantum mechanical calculations at the density functional theory level and 6- 311++G** basis set were carried out to obtain the optimized geometry and then, the comprehensive set of molecular descriptors was computed by using the Dragon software. Genetic algorithm (GA) was applied to select suitable descriptors which have the most correlation with lipophilicity of the studied compounds. Results: It was identified that such descriptors as Barysz matrix (SEigZ), hydrophilicity factor (Hy), Moriguchi octanol-water partition coefficient (MLOGP), electrophilicity (ω/eV) van der Waals volume (vWV) and lethal concentration (LC50/molkg-1) are the best descriptors for QSAR modeling. The high correlation coefficients and the low prediction errors for MLR, PCR and PLSR methods confirmed good predictability of the three models. Conclusion: In present study, the high correlation between experimental and predicted logP values of aniline derivatives indicated the validation and the good quality of the resulting three regression methods, but MLR regression procedure was a little better than the PCR and PLSR methods. It was concluded that the studied aniline derivatives are not hydrophilic compounds and this means these compounds hardly dissolve in water or an aqueous solvent.

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Study of Photocatalytic Dergradation, Kinetics and Microbial Activities of Copper (ii) Soya Urea Complex in Non Aqueous Media

Letters in Organic Chemistry ◽

10.2174/1570178617999200711175559 ◽

2020 ◽

Vol 17 ◽

Author(s):

Vandana Sukhadia ◽

Rashmi Sharma ◽

Asha Meena

Keyword(s):

Staphylococcus Aureus ◽

Photocatalytic Degradation ◽

Degradation Kinetics ◽

Waste Water Treatment ◽

Aqueous Media ◽

Research Work ◽

Solvent Polarity ◽

Urea Complex ◽

Pseudo First Order Reaction ◽

Aqueous Solvent

Aims: The aim of this research work is to synthesise, study and analyse photocatalytic degradation, kinetics and microbial activity of new surfactant Copper (II) soya urea complex(CSU). Background: Photocatalytic degradation has attracted the attention of scientific community throughout the world due to its multiple applications in environment, energy, waste water treatment, pollution control, green chemistry, etc. Copper (II) soya urea complex has been synthesized and characterized through FT-IR, NMR, ESR studies. Objective: Present work deals with the study of photocatalytic degradation of Copper (II) soya urea complex by using ZnO as semiconductor. This study employs a semiconductor catalyst using non polar and non aqueous solvent in photocatalytic degradation. Reaction rate is chosen as the photocatalytic activity, which has been governed by several factors. Antibacterial activities of Copper (II) complex have also been studied against Staphylococcus aureus. Method: Optical density (O.D.) was measured after different time intervals spectrophotometrically to measure the degradation of complex. Mueller-Hinton agar medium was used for antimicrobial activity of synthesized compound at different concentrations by disk/ well diffusion susceptibility testing. Result: Plot of 2+log O.D. (absorbance) versus time was plotted and found linear. The heterogeneous photocatalysis followed pseudo-first-order reaction kinetics.The present study suggests that Copper (II) soya urea (CSU) complex shows antibacterial activity against Staphylococcus aureus at different concentrations. Conclusion: The results were used to determine the rate of photocatalytic degradation of CSU complex .It has been found that rate of degradation varies with different parameters like concentration of complex, amount of catalyst, light intensity, solvent polarity etc. CSU complex derived from soyabean oil has been shown an inhibitory effect on the growth of S. aureus which may causes skin disease.

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α-Ketophosphonates in the Synthesis of α-iminophosphonates

Current Green Chemistry ◽

10.2174/2213346107666200226095806 ◽

2020 ◽

Vol 7 (2) ◽

pp. 226-238

Author(s):

Petro P. Ony`sko ◽

Tetyana I. Chudakova ◽

Vladimir V. Pirozhenko ◽

Alexandr B. Rozhenko

Keyword(s):

Bond Cleavage ◽

Direct Synthesis ◽

Equilibrium Mixture ◽

Primary Amines ◽

Alkyl Amines ◽

Protic Solvents ◽

Metallic Salts ◽

Direct Preparation ◽

Stage Synthesis ◽

Aprotic Dipolar Solvent

The potentialities of condensation of α-ketophosphonates with primary amines for direct synthesis of α-iminophosphonates have been revealed. Diesters of α-ketophosphonic acids react with the primary amines by two competitive pathways: with a formation of α-iminophosphonates or a C-P bond cleavage resulting in a hydrogen phosphonate and an acylated amine. In many cases, the latter undesirable pathway is dominant, especially for more nucleophilic alkyl amines. Using metallic salts of α-ketophosphonates avoids the C-P bond cleavage, allowing direct preparation of α-phosphorylated imines by the reaction with primary amines. This strategy provides an atom economy single-stage synthesis of iminophosphonates – precursors of bio relevant phosphorus analogs of α-amino acids. Methyl sodium iminophosphonates, bearing aryl or heteryl substituents at the imino carbon atom exist in solutions at room temperature as an equilibrium mixture of Z- and E-isomers. A configuration of the C=N bond can be controlled by the solvent: changing the aprotic dipolar solvent DMSO-d6 by water or alcohols leads to the change from a predominant Z-isomer to almost an exclusive E-form. In contrast, diesters of the respective iminophosphonates exist in non-protic solvents predominantly in Econfiguration. The solvent effect on E-Z stereochemistry is demonstrated by DFT calculations.

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