scholarly journals Phylogeny of the genus Hypophthalmus Cuvier, 1829 (Pimelodidae – Siluriformes), based on a multilocus analysis, indicates diversification and introgression in the Amazon basin

2019 ◽  
Vol 137 ◽  
pp. 285-292
Author(s):  
Julya Caroline Mesquita dos Santos ◽  
Edinaldo Silva Ferreira ◽  
Claudio Oliveira ◽  
Tamyres Barbosa Oliveira ◽  
Antonia Silvia Lima da Costa ◽  
...  
Acta Naturae ◽  
2017 ◽  
Vol 9 (4) ◽  
pp. 74-83
Author(s):  
N. G. Kukava ◽  
B. V. Titov ◽  
G. J. Osmak ◽  
N. A. Matveeva ◽  
O. G. Kulakova ◽  
...  

In search of genetic markers of myocardial infarction (MI) risk, which have prognostic significance for Russians, we performed a replication study of MI association with genetic variants of PCSK9 (rs562556), APOE (epsilon polymorphism, rs7412 and rs429358), LPL (rs320), MTHFR (rs1801133), eNOS (rs2070744), and the 9p21 region (rs1333049) in 405 patients with MI and 198 controls. Significant MI association was observed with variants of the lipid metabolism genes (PCSK9, APOE and LPL), and of eNOS. The SNPs in the MTHFR gene and the 9p21 region were not significantly associated with MI one by one but were included in several different MI-associated allelic combinations identified by multilocus analysis. Since we have not revealed nonlinear epistatic interactions between the components of the identified combinations, we postulate that the cumulative effect of genes that form a combination arises from the summation of their small independent contributions. The prognostic significance of the additive composite model built from the PCSK9, APOE, LPL, and eNOS genes as genetic markers was assessed using ROC analysis. After we included these markers in the previously published composite model of individual genetic risk of MI, the prognostic efficacy in our sample reached AUC = 0.676. However, the results obtained in this study certainly need to be replicated in an independent sample of Russians.


Acta Naturae ◽  
2017 ◽  
Vol 9 (4) ◽  
pp. 74-83
Author(s):  
N. G. Kukava ◽  
◽  
B. V. Titov ◽  
G. J. Osmak ◽  
N. A. Matveeva ◽  
...  

Author(s):  
B.R. FORSBERG, ◽  
M. GASTIL, ◽  
S.K. HAMILTON, ◽  
L.L. HESS, ◽  
I.B.T. LIMA, ◽  
...  
Keyword(s):  

2012 ◽  
Author(s):  
Tatiana Novichkova ◽  
Keyword(s):  

2019 ◽  
Vol 27 (1) ◽  
pp. 38-64
Author(s):  
Thomas B. Croat ◽  
Xavier Delannay ◽  
Orlando O. Ortiz ◽  
Pedro Diaz Jiménez

A review of the aroid tribe Caladieae is presented, and three new species of Caladium Vent. and seven new species of Syngonium Schott are described and illustrated. Two species, C. picturatum K. Koch & C. D. Bouché and C. steudnerifolium Engl., previously considered to be synonymous with C. bicolor (Aiton) Vent., are fully redescribed. New species of Caladium are C. cortesae Croat & E. G. Gonç., C. palaciosii Croat & L. P. Hannon, and C. stevensonii Croat & Delannay. New species of Syngonium are S. adsettiorum Croat, O. Ortiz & J. S. Harrison, S. bastimentoense O. Ortiz & Croat, S. brewsterense Croat & Delannay, S. churchillii Croat & O. Ortiz, S. litense Croat, S. purpureospathum Croat & Raz, and S. tacotalpense Díaz-Jiménez & Croat. Syngonium yurimaguense Engl. is also reported for the first time outside the Amazon Basin.


Atmosphere ◽  
2020 ◽  
Vol 11 (2) ◽  
pp. 208 ◽  
Author(s):  
Nazzareno Diodato ◽  
Naziano Filizola ◽  
Pasquale Borrelli ◽  
Panos Panagos ◽  
Gianni Bellocchi

The occurrence of hydrological extremes in the Amazon region and the associated sediment loss during rainfall events are key features in the global climate system. Climate extremes alter the sediment and carbon balance but the ecological consequences of such changes are poorly understood in this region. With the aim of examining the interactions between precipitation and landscape-scale controls of sediment export from the Amazon basin, we developed a parsimonious hydro-climatological model on a multi-year series (1997–2014) of sediment discharge data taken at the outlet of Óbidos (Brazil) watershed (the narrowest and swiftest part of the Amazon River). The calibrated model (correlation coefficient equal to 0.84) captured the sediment load variability of an independent dataset from a different watershed (the Magdalena River basin), and performed better than three alternative approaches. Our model captured the interdecadal variability and the long-term patterns of sediment export. In our reconstruction of yearly sediment discharge over 1859–2014, we observed that landscape erosion changes are mostly induced by single storm events, and result from coupled effects of droughts and storms over long time scales. By quantifying temporal variations in the sediment produced by weathering, this analysis enables a new understanding of the linkage between climate forcing and river response, which drives sediment dynamics in the Amazon basin.


2021 ◽  
Author(s):  
Luz Garcia-Longoria ◽  
Jaime Muriel ◽  
Sergio Magallanes ◽  
Zaira Hellen Villa-Galarce ◽  
Leonila Ricopa ◽  
...  

Abstract Characterizing the diversity and structure of host-parasite communities is crucial to understanding their eco-evolutionary dynamics. Malaria and related haemosporidian parasites are responsible for fitness loss and mortality in bird species worldwide. However, despite exhibiting the greatest ornithological biodiversity, avian haemosporidians from Neotropical regions are quite unexplored. Here, we analyse the genetic diversity of bird haemosporidian parasites (Plasmodium and Haemoproteus) in 1,336 individuals belonging to 206 bird species to explore for differences in diversity of parasite lineages and bird species across five well-differentiated Peruvian ecoregions. We detected 70 different haemosporidian lineages infecting 74 bird species. We showed that 25 out of the 70 haplotypes had not been previously recorded. Moreover, we also identified 81 new host – parasite interactions representing new host records for these haemosporidian parasites. Our outcomes revealed that the effective diversity (as well as the richness, abundance, and Shannon-Weaver index) for both birds and parasite lineages was higher in Amazon basin ecoregions. Furthermore, we also showed that ecoregions with greater diversity of bird species also had high parasite richness, hence suggesting that host community is crucial in explaining parasite richness. Generalist parasites were found in ecoregions with lower bird diversity, implying that the abundance and richness of hosts may shape the exploitation strategy followed by haemosporidian parasites. These outcomes reveal that Neotropical region is a major reservoir of unidentified haemosporidian lineages. Further studies analysing host distribution and specificity of these parasites in the tropics will provide important knowledge about phylogenetic relationships, phylogeography, and patterns of evolution and distribution of haemosporidian parasites.


2021 ◽  
Vol 55 (1) ◽  
pp. 215-226
Author(s):  
Flávia Alessandra Silva Nonato ◽  
Thaisa Sala Michelan ◽  
Pâmela Virgolino Freitas ◽  
Calebe Maia ◽  
Luciano Fogaça de Assis Montag

2021 ◽  
Vol 13 (13) ◽  
pp. 7088
Author(s):  
Juan Manuel Orozco-Ortiz ◽  
Clara Patricia Peña-Venegas ◽  
Sara Louise Bauke ◽  
Christian Borgemeister ◽  
Ramona Mörchen ◽  
...  

Whereas many researchers still approach Terra Preta (TP) as a soil category, new evidence suggests that TP refers to a directional grading of soil property changes (i.e., color, pH, nutrients, etc.) within human-made soils, originating from human activities in pre-Columbian times. Currently, most TP research focuses on the Brazilian part of the Amazon basin, but only little information is available on TP soils in the Colombian Amazon. Here, we sampled four TP and surrounding soils in the Colombian Amazon region at different soil depths and analyzed them for (i) general soil properties such as color, pH and texture, (ii) soil organic carbon and black carbon (BC) contents, the latter using benzene polycarboxylic acids as molecular marker, (iii) phosphorus availability based on sequential fractionation, and (iv) microbial residue contents using amino sugars. Our data from Colombia’s middle Caquetá River and Leticia confirmed that SOC, BC, and total P were present in significantly higher concentrations in the TP areas than the surrounding soils, while pH values and microbial residue contents were unchanged. The enrichment of P forms comprised both easily extractable and stable P pools, which both dominated to a different degree, both in TP and adjacent soils. The different degree of SOC, BC and P enrichment suggests different amounts of waste disposal by the ancient populations at different TP sites, now warranting further research for reconstructing ancient population sizes from TP chemical analyses.


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