Molecular epidemiology ofBartonellaspecies isolated from ground squirrels and other rodents in northern California
SUMMARYBartonellaspp. are endemic in wild rodents in many parts of the world. A study conducted in two northern California counties (Sonoma and Yolo) sampling California ground squirrels (Otospermophilus beecheyi) and four other rodent species (Peromyscus maniculatus, P. boylii, P. trueiandNeotoma fuscipes) led to the isolation of small Gram-negative bacilli which were identified asBartonellaspp. based on colony morphology, polymerase chain reaction–restriction fragment length polymorphism (PCR–RFLP) and partial gene sequencing. Overall,Bartonellaspp. were isolated from the blood of 71% (32/45) of the ground squirrels and one third (22/66) of the other rodents. PCR–RFLP analysis of thegltA and 16S rRNA genes yielded seven unique profiles, four for the ground squirrels and three for the other rodents. Isolates from each PCR–RFLP profiles were submitted for partial sequencing. Ground squirrel isolates were most closely related toB. washoensis, whereas the other rodent isolates were closest toB. vinsoniisubsp.vinsoniiandB. vinsoniisubsp.arupensis. Two of these three species or subspecies are known zoonotic agents.