scholarly journals Transfer Learning Study of Gas Adsorption in Metal–Organic Frameworks

2020 ◽  
Vol 12 (30) ◽  
pp. 34041-34048 ◽  
Author(s):  
Ruimin Ma ◽  
Yamil J. Colón ◽  
Tengfei Luo
2020 ◽  
Author(s):  
RUIMIN MA ◽  
Yamil J. Colon ◽  
Tengfei Luo

<p>Metal-organic frameworks (MOFs) are a class of materials promising for gas adsorption due to their highly tunable nano-porous structures and host-guest interactions. While machine learning (ML) has been leveraged to aid the design or screen of MOFs for different purposes, the needs of big data are not always met, limiting the applicability of ML models trained against small data sets. In this work, we introduce a transfer learning technique to improve the accuracy and applicability of ML models trained with small amount of MOF adsorption data. This technique leverages potentially shareable knowledge from a source task to improve the models on the target tasks. As demonstrations, a deep neural network (DNN) trained on H<sub>2</sub> adsorption data with 13,506 MOF structures at 100 bar and 243 K is used as the source task. When transferring knowledge from the source task to H<sub>2</sub> adsorption at 100 bar and 130 K (one target task), the predictive accuracy on target task was improved from 0.960 (direct training) to 0.991 (transfer learning). We also tested transfer learning across different gas species (i.e. from H<sub>2</sub> to CH<sub>4</sub>), with predictive accuracy of CH<sub>4</sub> adsorption being improved from 0.935 (direct training) to 0.980 (transfer learning). Based on further analysis, transfer learning will always work on the target tasks with low generalizability. However, when transferring the knowledge from the source task to Xe/Kr adsorption, the transfer learning does not improve the predictive accuracy, which is attributed to the lack of common descriptors that is key to the underlying knowledge. <b></b></p>


2020 ◽  
Author(s):  
RUIMIN MA ◽  
Yamil J. Colon ◽  
Tengfei Luo

<p>Metal-organic frameworks (MOFs) are a class of materials promising for gas adsorption due to their highly tunable nano-porous structures and host-guest interactions. While machine learning (ML) has been leveraged to aid the design or screen of MOFs for different purposes, the needs of big data are not always met, limiting the applicability of ML models trained against small data sets. In this work, we introduce a transfer learning technique to improve the accuracy and applicability of ML models trained with small amount of MOF adsorption data. This technique leverages potentially shareable knowledge from a source task to improve the models on the target tasks. As demonstrations, a deep neural network (DNN) trained on H<sub>2</sub> adsorption data with 13,506 MOF structures at 100 bar and 243 K is used as the source task. When transferring knowledge from the source task to H<sub>2</sub> adsorption at 100 bar and 130 K (one target task), the predictive accuracy on target task was improved from 0.960 (direct training) to 0.991 (transfer learning). We also tested transfer learning across different gas species (i.e. from H<sub>2</sub> to CH<sub>4</sub>), with predictive accuracy of CH<sub>4</sub> adsorption being improved from 0.935 (direct training) to 0.980 (transfer learning). Based on further analysis, transfer learning will always work on the target tasks with low generalizability. However, when transferring the knowledge from the source task to Xe/Kr adsorption, the transfer learning does not improve the predictive accuracy, which is attributed to the lack of common descriptors that is key to the underlying knowledge. <b></b></p>


2020 ◽  
Author(s):  
Ali Raza ◽  
Arni Sturluson ◽  
Cory Simon ◽  
Xiaoli Fern

Virtual screenings can accelerate and reduce the cost of discovering metal-organic frameworks (MOFs) for their applications in gas storage, separation, and sensing. In molecular simulations of gas adsorption/diffusion in MOFs, the adsorbate-MOF electrostatic interaction is typically modeled by placing partial point charges on the atoms of the MOF. For the virtual screening of large libraries of MOFs, it is critical to develop computationally inexpensive methods to assign atomic partial charges to MOFs that accurately reproduce the electrostatic potential in their pores. Herein, we design and train a message passing neural network (MPNN) to predict the atomic partial charges on MOFs under a charge neutral constraint. A set of ca. 2,250 MOFs labeled with high-fidelity partial charges, derived from periodic electronic structure calculations, serves as training examples. In an end-to-end manner, from charge-labeled crystal graphs representing MOFs, our MPNN machine-learns features of the local bonding environments of the atoms and learns to predict partial atomic charges from these features. Our trained MPNN assigns high-fidelity partial point charges to MOFs with orders of magnitude lower computational cost than electronic structure calculations. To enhance the accuracy of virtual screenings of large libraries of MOFs for their adsorption-based applications, we make our trained MPNN model and MPNN-charge-assigned computation-ready, experimental MOF structures publicly available.<br>


2020 ◽  
Vol 124 (49) ◽  
pp. 26801-26813
Author(s):  
Dayton J. Vogel ◽  
Zachary R. Lee ◽  
Caitlin A. Hanson ◽  
Susan E. Henkelis ◽  
Caris M. Smith ◽  
...  

2016 ◽  
Vol 138 (10) ◽  
pp. 3371-3381 ◽  
Author(s):  
Yong Yan ◽  
Michal Juríček ◽  
François-Xavier Coudert ◽  
Nicolaas A. Vermeulen ◽  
Sergio Grunder ◽  
...  

ChemSusChem ◽  
2017 ◽  
Vol 10 (7) ◽  
pp. 1543-1553 ◽  
Author(s):  
Nicolas Chanut ◽  
Sandrine Bourrelly ◽  
Bogdan Kuchta ◽  
Christian Serre ◽  
Jong-San Chang ◽  
...  

2016 ◽  
Vol 52 (14) ◽  
pp. 3003-3006 ◽  
Author(s):  
Linyi Bai ◽  
Binbin Tu ◽  
Yi Qi ◽  
Qiang Gao ◽  
Dong Liu ◽  
...  

Incorporating supramolecular recognition units, crown ether rings, into metal–organic frameworks enables the docking of metal ions through complexation for enhanced performance.


2021 ◽  
Vol 50 (14) ◽  
pp. 4757-4764
Author(s):  
Yan Yan Li ◽  
Dong Luo ◽  
Kun Wu ◽  
Xiao-Ping Zhou

This review article summarizes the assembly, structures, and topologies of gyroidal metal–organic frameworks. Their applications in gas adsorption, catalysis, sensors, and luminescent materials are also discussed in detail.


2021 ◽  
Author(s):  
Adam Sapnik ◽  
Christopher W. Ashling ◽  
Lauren K. Macreadie ◽  
Seok J. Lee ◽  
Tim Johnson ◽  
...  

<div><p>Disordered metal–organic frameworks are emerging as an attractive class of functional materials, however their applications in gas storage and separation have yet to be fully explored. Here, we investigate gas adsorption in the topologically disordered Fe-BTC framework and its crystalline counterpart, MIL‑100. Despite their similar chemistry and local structure, they exhibit very different sorption behaviour towards a range of industrial gases, noble gases and hydrocarbons. Virial analysis reveals that Fe-BTC has enhanced interaction strength with guest molecules compared to MIL‑100. Most notably, we observe striking discrimination between the adsorption of C<sub>3</sub>H<sub>6</sub> and C<sub>3</sub>H<sub>8</sub> in Fe‑BTC, with over a twofold increase in the amount of C<sub>3</sub>H<sub>6</sub> being adsorbed than C<sub>3</sub>H<sub>8</sub>. Thermodynamic selectivity towards a range of industrially relevant binary mixtures is probed using ideal adsorbed solution theory (IAST). Together, this suggests the disordered material may possess powerful separation capabilities that are rare even amongst crystalline frameworks.</p></div>


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