scholarly journals Genetically Encoding Ultrastable Virus-like Particles Encapsulating Functional DNA Nanostructures in Living Bacteria

Author(s):  
Shai Zilberzwige-Tal ◽  
Dan Mark Alon ◽  
Danielle Gazit ◽  
Shahar Zachariah ◽  
Amit Hollander ◽  
...  
2020 ◽  
Author(s):  
Shai Zilberzwige-Tal ◽  
Dan Alon ◽  
Danielle Gazit ◽  
Shahar Zachariah ◽  
Amit Hollander ◽  
...  

Abstract DNA nanotechnology is leading the field of in vitro molecular-scale device engineering, accumulating to a dazzling array of applications from zeolite-like catalysts to bio-imaging. However, while DNA nanostructures' function is robust under in vitro settings, their implementation in real-world conditions requires overcoming their rapid degradation and subsequent loss of function. Viruses are incredibly sophisticated supramolecular assemblies, able to protect their nucleic acid content in the relatively inhospitable biological environment. Inspired by this natural ability, we engineered both in vitro and in vivo technologies, enabling the encapsulation and protection of functional DNA nanostructures inside MS2 bacteriophage virus-like particles (VLPs). We demonstrate the ssDNA-VLPs nanocomposites (NCs) abilities to encapsulate single-stranded-DNA (ssDNA) of an unprecedented variety of sizes (200–1500 nucleotides (nt)), sequences, and structures while retaining their functionality. Moreover, by exposing these NCs to hostile biological conditions, such as human blood serum, we exhibit that the VLPs serves as an excellent protective shell. To the best of our knowledge, these engineered NCs pose key properties that are yet unattainable by current fabrication methods.


2021 ◽  
Vol 133 (28) ◽  
Author(s):  
Koyomi Nakazawa ◽  
Farah El Fakih ◽  
Vincent Jallet ◽  
Caroline Rossi‐Gendron ◽  
Marina Mariconti ◽  
...  

1977 ◽  
Vol 26 (1) ◽  
pp. 359-371
Author(s):  
F.L. Schuster ◽  
J.S. Clemente

Exposure of axenic cultures of the amoeboflagellate Naegleria gruberi EGs to the thymidine analogue 5-bromo-2′-deoxyuridine (BrdU) resulted in the induction of virus-like particles (VLP) and various structures associated with their development and presumed transmission. Previously, VLP induction could be accomplished only by growing amoebae in the presence of living bacteria as a food source. Addition of excess thymidine along with BrdU did not block induction of particles. This account demonstrates that the EGs-VLP system responded to BrdU as do a number of mammalian cell lines harbouring latent viruses, and provides the basis for future work on the infectivity of the VLPs for other amoebae as well as tissue culture cells.


Nano Letters ◽  
2007 ◽  
Vol 7 (12) ◽  
pp. 3832-3839 ◽  
Author(s):  
John Tumpane ◽  
Ravindra Kumar ◽  
Erik P. Lundberg ◽  
Peter Sandin ◽  
Nittaya Gale ◽  
...  

2015 ◽  
pp. 93-130 ◽  
Author(s):  
Jiang Li ◽  
Fan Li ◽  
Hao Pei ◽  
Lihua Wang ◽  
Qing Huang ◽  
...  

2008 ◽  
Vol 52 (1) ◽  
pp. 97-98
Author(s):  
J. Tumpane ◽  
E. P. Lundberg ◽  
L. M. Wilhelmsson ◽  
T. Brown ◽  
B. Norden

2021 ◽  
Vol 60 (28) ◽  
Author(s):  
Koyomi Nakazawa ◽  
Farah El Fakih ◽  
Vincent Jallet ◽  
Caroline Rossi‐Gendron ◽  
Marina Mariconti ◽  
...  

Author(s):  
Koyomi Nakazawa ◽  
Farah El Fakih ◽  
Vincent Jallet ◽  
Caroline Rossi‐Gendron ◽  
Marina Mariconti ◽  
...  

Small ◽  
2013 ◽  
Vol 9 (13) ◽  
pp. 2210-2222 ◽  
Author(s):  
Zhen-Gang Wang ◽  
Chen Song ◽  
Baoquan Ding

Molecules ◽  
2020 ◽  
Vol 25 (21) ◽  
pp. 5099
Author(s):  
Saminathan Ramakrishnan ◽  
Sivaraman Subramaniam ◽  
Charlotte Kielar ◽  
Guido Grundmeier ◽  
A. Francis Stewart ◽  
...  

Immobile Holliday junctions represent not only the most fundamental building block of structural DNA nanotechnology but are also of tremendous importance for the in vitro investigation of genetic recombination and epigenetics. Here, we present a detailed study on the room-temperature assembly of immobile Holliday junctions with the help of the single-strand annealing protein Redβ. Individual DNA single strands are initially coated with protein monomers and subsequently hybridized to form a rigid blunt-ended four-arm junction. We investigate the efficiency of this approach for different DNA/protein ratios, as well as for different DNA sequence lengths. Furthermore, we also evaluate the potential of Redβ to anneal sticky-end modified Holliday junctions into hierarchical assemblies. We demonstrate the Redβ-mediated annealing of Holliday junction dimers, multimers, and extended networks several microns in size. While these hybrid DNA–protein nanostructures may find applications in the crystallization of DNA–protein complexes, our work shows the great potential of Redβ to aid in the synthesis of functional DNA nanostructures under mild reaction conditions.


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