A Comprehensive Model for the Allosteric Regulation of Mammalian Ribonucleotide Reductase. Functional Consequences of ATP- and dATP-Induced Oligomerization of the Large Subunit†

Biochemistry ◽  
2002 ◽  
Vol 41 (2) ◽  
pp. 462-474 ◽  
Author(s):  
Ossama B. Kashlan ◽  
Charles P. Scott ◽  
James D. Lear ◽  
Barry S. Cooperman
Virology ◽  
1995 ◽  
Vol 210 (2) ◽  
pp. 345-360 ◽  
Author(s):  
J.C.R. Hunter ◽  
C.C. Smith ◽  
Debashish Bose ◽  
Michael Kulka ◽  
R. Broderick ◽  
...  

2011 ◽  
Vol 4 (10) ◽  
pp. 1328-1354 ◽  
Author(s):  
Sanath R. Wijerathna ◽  
Md. Faiz Ahmad ◽  
Hai Xu ◽  
James W. Fairman ◽  
Andrew Zhang ◽  
...  

2013 ◽  
Vol 288 (20) ◽  
pp. 13951-13959 ◽  
Author(s):  
Yan Zhang ◽  
Xiuxiang An ◽  
JoAnne Stubbe ◽  
Mingxia Huang

The small subunit (β2) of class Ia ribonucleotide reductase (RNR) houses a diferric tyrosyl cofactor (Fe2III-Y•) that initiates nucleotide reduction in the large subunit (α2) via a long range radical transfer (RT) pathway in the holo-(α2)m(β2)n complex. The C-terminal tails of β2 are predominantly responsible for interaction with α2, with a conserved tyrosine residue in the tail (Tyr356 in Escherichia coli NrdB) proposed to participate in cofactor assembly/maintenance and in RT. In the absence of structure of any holo-RNR, the role of the β tail in cluster assembly/maintenance and its predisposition within the holo-complex have remained unknown. In this study, we have taken advantage of the unusual heterodimeric nature of the Saccharomyces cerevisiae RNR small subunit (ββ′), of which only β contains a cofactor, to address both of these issues. We demonstrate that neither β-Tyr376 nor β′-Tyr323 (Tyr356 equivalent in NrdB) is required for cofactor assembly in vivo, in contrast to the previously proposed mechanism for E. coli cofactor maintenance and assembly in vitro. Furthermore, studies with reconstituted-ββ′ and an in vivo viability assay show that β-Tyr376 is essential for RT, whereas Tyr323 in β′ is not. Although the C-terminal tail of β′ is dispensable for cofactor formation and RT, it is essential for interactions with β and α to form the active holo-RNR. Together the results provide the first evidence of a directed orientation of the β and β′ C-terminal tails relative to α within the holoenzyme consistent with a docking model of the two subunits and argue against RT across the β β′ interface.


1988 ◽  
Vol 16 (2) ◽  
pp. 91-94 ◽  
Author(s):  
OLLE NILSSON ◽  
TOMAS LUNDQVIST ◽  
SOLVEIG HAHNE ◽  
BRITT-MARIE SJÖBERG

Blood ◽  
1995 ◽  
Vol 86 (9) ◽  
pp. 3575-3582 ◽  
Author(s):  
HN Bu-Ghanim ◽  
AW Segal ◽  
NH Keep ◽  
CM Casimir

Defects in gp91-phox, the large subunit of cytochrome b558 (b-245) give rise to X-linked chronic granulomatous disease (CGD), a rare inherited condition characterized by an extreme susceptibility to bacterial and fungal infection. In the majority of cases, the phagocytes are unable to generate any superoxide owing to complete absence of the flavocytochrome. However, a small minority of these patients do have some phagocytic oxidase activity. We describe here an analysis of the molecular basis of the disease in three such variant patients with lesions in the gene coding for gp91-phox on the X chromosome. Three different genetic lesions were found, resulting in the substitution of tyrosine for cysteine 244, a deletion of one of three lysines 313 through 315, and the deletion of the six C-terminal amino acids, respectively. The functional consequences of these defects on oxidase activity was a reduction to 12%, 3.6%, and 2.1% of the normal levels, respectively. Corresponding levels of gp91-phox were 20%, 8%, and 16% of normal classifying these patients as X91-. Microbicidal assays showed that killing of Staphylococcus aureus was grossly impaired in cells in which there was 12% normal activity. This implies that if gene therapy is to be applied, it must restore oxidase activity to a much higher level than that present in the cells of this patient. The sites of two of the mutations were analyzed on a model of the C-terminal half of the gp91-phox, based on the crystal structure of the homologous protein ferrodoxin NADP reductase. Possible structural consequences of the mutations were examined.


1996 ◽  
Vol 271 (43) ◽  
pp. 26582-26587 ◽  
Author(s):  
Rolf Eliasson ◽  
Elisabet Pontis ◽  
Albert Jordan ◽  
Peter Reichard

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