Transforming Growth Factor β1:  Three-Dimensional Structure in Solution and Comparison with the X-ray Structure of Transforming Growth Factor β2†,‡

Biochemistry ◽  
1996 ◽  
Vol 35 (26) ◽  
pp. 8517-8534 ◽  
Author(s):  
Andrew P. Hinck ◽  
Sharon J. Archer ◽  
Su Wen Qian ◽  
Anita B. Roberts ◽  
Michael B. Sporn ◽  
...  
1988 ◽  
Vol 16 (6) ◽  
pp. 949-953 ◽  
Author(s):  
JOHN P. PRIESTLE ◽  
HANS-PETER SCHÄR ◽  
MARKUS G. GRÜTTER

Summary The three-dimensional structure of human recombinant interleukin-1β has been determined at 0.24 nm resolution by X-ray crystallographic techniques. The partially refined model has a crystallographic R-factor of just under 19%. The structure is composed of 12 β-strands forming a complex network of hydrogen bonds. The core of the structure can best be described as a tetrahedron whose edges are each formed by two antiparallel β-strands. The interior of this structure is filled with hydrophobic side-chains. There is a 3-fold repeat in the folding of the polypeptide chain. Although this folding pattern suggests gene triplication, no significant internal sequence homology between topologically corresponding residues exists. The folding topology of interleukin-1β is very similar to that described by A. D. McLachlan [(1979) J. Mol. Biol. 133, 557–563] for soybean trypsin inhibitor.


Materia Japan ◽  
2007 ◽  
Vol 46 (12) ◽  
pp. 823-823
Author(s):  
Seiji Kawado ◽  
Toshinori Taishi ◽  
Satoshi Iida ◽  
Yoshifumi Suzuki ◽  
Yoshinori Chikaura ◽  
...  

2004 ◽  
Vol 693 (1-3) ◽  
pp. 199-203 ◽  
Author(s):  
Quan-Zheng Zhang ◽  
Can-Zhong Lu ◽  
Wen-Bin Yang ◽  
Shu-Mei Chen ◽  
Ya-Qin Yu

2004 ◽  
Vol 573 (2) ◽  
pp. 191-203 ◽  
Author(s):  
P. Geissbühler ◽  
P. Fenter ◽  
E. DiMasi ◽  
G. Srajer ◽  
L.B. Sorensen ◽  
...  

2021 ◽  
Author(s):  
Xianke Wang ◽  
Lin Chen ◽  
Bin Huang ◽  
Jin Yuan ◽  
Lili Shang ◽  
...  

Abstract Bamboo is a natural fiber composite with layered structure. Millions of years of evolution have endowed bamboo with the most effective structure in nature. The ingenious microstructure provides bamboo with excellent mechanical properties. Bamboo culm is composed of the cortex, a middle layer, and a pith ring. The cortex refers to the area starting from the periphery of the culm wall to the vascular bundles. The present study obtained the two-dimensional microstructure of bamboo cortex cells by optical microscopy and characterized the three-dimensional structure through high-resolution X-ray microtomography (µCT). Based on the analysis, the bamboo cortex cells were classified into four layers: epidermis layer, hypodermis layer, transitional layer, and parenchyma layer. The average pore volume of the bamboo cortex was about 1.54×10-6 mm3, the porosity was 36.1%, and the relative density was 0.639. The epidermis layer, hypodermis layer, transition layer, and parenchyma layer cells had a cell cavity volume of 917.81 µm3, 714.22 µm3, 1258.19 µm3, and 3117.65 µm3, respectively, an average length3d (L) of 19.38 µm, 25.84 µm, 26.46 µm, and 34.88 µm, respectively, an average breadth3d (W) of 14.11 µm, 9.44 µm, 15.22 µm, and 16.6 µm, respectively, and sphericity of 0.85, 0.76, 0.75, and 0.78, respectively. Studies on bamboo anatomical structure, especially three-dimensional digital characterization, will enrich the bamboo microstructure database. Besides, the three-dimensional structure of the bamboo cortex revealed in this study can provide a reference for optimizing composite material hierarchy and biomimetic design.


EP Europace ◽  
2020 ◽  
Vol 22 (10) ◽  
pp. 1590-1599
Author(s):  
Maximilian Funken ◽  
Tobias Bruegmann ◽  
Philipp Sasse

Abstract Aims Besides providing mechanical stability, fibroblasts in the heart could modulate the electrical properties of cardiomyocytes. Here, we aim to develop a three-dimensional hetero-cellular model to analyse the electric interaction between fibroblasts and human cardiomyocytes in vitro using selective optogenetic de- or hyperpolarization of fibroblasts. Methods and results NIH3T3 cell lines expressing the light-sensitive ion channel Channelrhodopsin2 or the light-induced proton pump Archaerhodopsin were generated for optogenetic depolarization or hyperpolarization, respectively, and characterized by patch clamp. Cardiac bodies consisting of 50% fibroblasts and 50% human pluripotent stem cell-derived cardiomyocytes were analysed by video microscopy and membrane potential was measured with sharp electrodes. Myofibroblast activation in cardiac bodies was enhanced by transforming growth factor-β1 (TGF-β1)-stimulation. Connexin-43 expression was analysed by qPCR and fluorescence recovery after photobleaching. Illumination of Channelrhodopsin2 or Archaerhodopsin expressing fibroblasts induced inward currents and depolarization or outward currents and hyperpolarization. Transforming growth factor-β1-stimulation elevated connexin-43 expression and increased cell–cell coupling between fibroblasts as well as increased basal beating frequency and cardiomyocyte resting membrane potential in cardiac bodies. Illumination of cardiac bodies generated with Channelrhodopsin2 fibroblasts accelerated spontaneous beating, especially after TGF-β1-stimulation. Illumination of cardiac bodies prepared with Archaerhodopsin expressing fibroblasts led to hyperpolarization of cardiomyocytes and complete block of spontaneous beating after TGF-β1-stimulation. Effects of light were significantly smaller without TGF-β1-stimulation. Conclusion Transforming growth factor-β1-stimulation leads to increased hetero-cellular coupling and optogenetic hyperpolarization of fibroblasts reduces TGF-β1 induced effects on cardiomyocyte spontaneous activity. Optogenetic membrane potential manipulation selectively in fibroblasts in a new hetero-cellular cardiac body model allows direct quantification of fibroblast–cardiomyocyte coupling in vitro.


Biochemistry ◽  
1995 ◽  
Vol 34 (32) ◽  
pp. 10256-10265 ◽  
Author(s):  
Toshiyuki Kohno ◽  
Jae Il Kim ◽  
Kuniko Kobayashi ◽  
Yoshio Kodera ◽  
Tadakazu Maeda ◽  
...  

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