Successful Application of TD-DFT in Transient Absorption Spectra Assignment

2005 ◽  
Vol 7 (2) ◽  
pp. 243-246 ◽  
Author(s):  
Liang Shen ◽  
Hong-Yu Zhang ◽  
Hong-Fang Ji
Molecules ◽  
2019 ◽  
Vol 24 (23) ◽  
pp. 4402
Author(s):  
Skotnicki ◽  
Taras-Goslinska ◽  
Janik ◽  
Bobrowski

Oxidative damage to 2-thiouracil (2-TU) by hydroxyl (•OH) and azide (N3) radicals produces various primary reactive intermediates. Their optical absorption spectra and kinetic characteristics were studied by pulse radiolysis with UV-vis spectrophotometric and conductivity detection and by time-dependent density functional theory (TD-DFT) method. The transient absorption spectra recorded in the reactions of •OH with 2-TU depend on the concentration of 2-TU, however, only slightly on pH. At low concentrations, they are characterized by a broad absorption band with a weakly pronounced maxima located at λ = 325, 340 and 385 nm, whereas for high concentrations, they are dominated by an absorption band with λmax ≈ 425 nm. Based on calculations using TD-DFT method, the transient absorption spectra at low concentration of 2-TU were assigned to the ●OH-adducts to the double bond at C5 and C6 carbon atoms (3●, 4●) and 2c-3e bonded ●OH adduct to sulfur atom (1…●OH) and at high concentration of 2-TU also to the dimeric 2c-3e S-S-bonded radical in neutral form (2●). The dimeric radical (2●) is formed in the reaction of thiyl-type radical (6●) with 2-TU and both radicals are in an equilibrium with Keq = 4.2 × 103 M−1. Similar equilibrium (with Keq = 4.3 × 103 M−1) was found for pH above the pKa of 2-TU which involves admittedly the same radical (6●) but with the dimeric 2c-3e S-S bonded radical in anionic form (2●−). In turn, ●N3-induced oxidation of 2-TU occurs via radical cation with maximum spin location on the sulfur atom which subsequently undergoes deprotonation at N1 atom leading again to thiyl-type radical (6●). This radical is a direct precursor of dimeric radical (2●).


Author(s):  
Julian Hniopek ◽  
Carolin Müller ◽  
Thomas Bocklitz ◽  
Michael Schmitt ◽  
Benjamin Dietzek ◽  
...  

2015 ◽  
Vol 32 (8) ◽  
pp. 1693
Author(s):  
Hong Liu ◽  
Yulei Bai ◽  
Yun Zhang ◽  
Shuangli Ye ◽  
Weichao Xu ◽  
...  

Transient absorption spectra have been obtained by pulsed radiolysis and flash spectroscopy of neutral and alkaline solutions of benzophenone under anaerobic conditions. These spectra demonstrate the formation of the ketyl radical ion (C 6 H 5 ) 2 Ċ—O - as a primary product resulting from electron attachment to benzophenone. In neutral solution, the rapid neutralization of the ketyl ion produces the neutral radical (C 6 H 5 ) 2 Ċ—OH, and this is shown by a change in the optical absorption spectrum. Neither of the absorption spectra due to these species is observed in acid solutions. These observations show that in neutral and alkaline solution, the hydrated electron reacts directly with the solute, whereas in acid solution it is converted to the hydrogen atom before reacting with the solute.


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