scholarly journals Crystal structure of Mil (Mth680): internal duplication and similarity between the Imp4/Brix domain and the anticodon‐binding domain of class IIa aminoacyl‐tRNA synthetases

EMBO Reports ◽  
2005 ◽  
Vol 6 (2) ◽  
pp. 140-146 ◽  
Author(s):  
Chyan Leong Ng ◽  
David Waterman ◽  
Eugene V Koonin ◽  
Alfred A Antson ◽  
Miguel Ortiz‐Lombardía
2010 ◽  
Vol 66 (7) ◽  
pp. 813-820 ◽  
Author(s):  
Takuhiro Ito ◽  
Noriko Kiyasu ◽  
Risa Matsunaga ◽  
Seizo Takahashi ◽  
Shigeyuki Yokoyama

Aminoacyl-tRNA synthetases produce aminoacyl-tRNAs from the substrate tRNA and its cognate amino acid with the aid of ATP. Two types of glutamyl-tRNA synthetase (GluRS) have been discovered: discriminating GluRS (D-GluRS) and nondiscriminating GluRS (ND-GluRS). D-GluRS glutamylates tRNAGluonly, while ND-GluRS glutamylates both tRNAGluand tRNAGln. ND-GluRS produces the intermediate Glu-tRNAGln, which is converted to Gln-tRNAGlnby Glu-tRNAGlnamidotransferase. Two GluRS homologues fromThermotoga maritima, TM1875 and TM1351, have been biochemically characterized and it has been clarified that only TM1875 functions as an ND-GluRS. Furthermore, the crystal structure of theT. maritimaND-GluRS, TM1875, was determined in complex with a Glu-AMP analogue at 2.0 Å resolution. TheT. maritimaND-GluRS contains a characteristic structure in the connective-peptide domain, which is inserted into the catalytic Rossmann-fold domain. The glutamylation ability of tRNAGlnby ND-GluRS was measured in the presence of the bacterial Glu-tRNAGlnamidotransferase GatCAB. Interestingly, the glutamylation efficiency was not affected even in the presence of excess GatCAB. Therefore, GluRS avoids competition with GatCAB and glutamylates tRNAGln.


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