Self-assembly of molecular tripods in two dimensions: structure and thermodynamics from computer simulations

RSC Advances ◽  
2013 ◽  
Vol 3 (47) ◽  
pp. 25159 ◽  
Author(s):  
Paweł Szabelski ◽  
Wojciech Rżysko ◽  
Tomasz Pańczyk ◽  
Elke Ghijsens ◽  
Kazukuni Tahara ◽  
...  
Soft Matter ◽  
2014 ◽  
Vol 10 (45) ◽  
pp. 9167-9176 ◽  
Author(s):  
Gustavo A. Chapela ◽  
Orlando Guzmán ◽  
José Adrián Martínez-González ◽  
Pedro Díaz-Leyva ◽  
Jacqueline Quintana-H

A vibrating version of patchy particles in two dimensions is introduced to study self-assembly of kagome lattices, disordered networks of looping structures, and linear arrays.


2018 ◽  
Vol 54 (63) ◽  
pp. 8749-8752 ◽  
Author(s):  
Damian Nieckarz ◽  
Paweł Szabelski

Monte Carlo simulations reveal the role of surface conformers in self-assembly on crystalline supports.


Soft Matter ◽  
2020 ◽  
Vol 16 (27) ◽  
pp. 6443-6443
Author(s):  
Guo-Jun Liao ◽  
Carol K. Hall ◽  
Sabine H. L. Klapp

Correction for ‘Dynamical self-assembly of dipolar active Brownian particles in two dimensions’ by Guo-Jun Liao et al., Soft Matter, 2020, 16, 2208–2223, DOI: 10.1039/C9SM01539F.


2017 ◽  
Vol 114 (8) ◽  
pp. 1856-1861 ◽  
Author(s):  
Bernd Illing ◽  
Sebastian Fritschi ◽  
Herbert Kaiser ◽  
Christian L. Klix ◽  
Georg Maret ◽  
...  

In a recent commentary, J. M. Kosterlitz described how D. Thouless and he got motivated to investigate melting and suprafluidity in two dimensions [Kosterlitz JM (2016)J Phys Condens Matter28:481001]. It was due to the lack of broken translational symmetry in two dimensions—doubting the existence of 2D crystals—and the first computer simulations foretelling 2D crystals (at least in tiny systems). The lack of broken symmetries proposed by D. Mermin and H. Wagner is caused by long wavelength density fluctuations. Those fluctuations do not only have structural impact, but additionally a dynamical one: They cause the Lindemann criterion to fail in 2D in the sense that the mean squared displacement of atoms is not limited. Comparing experimental data from 3D and 2D amorphous solids with 2D crystals, we disentangle Mermin–Wagner fluctuations from glassy structural relaxations. Furthermore, we demonstrate with computer simulations the logarithmic increase of displacements with system size: Periodicity is not a requirement for Mermin–Wagner fluctuations, which conserve the homogeneity of space on long scales.


2019 ◽  
Vol 5 (9) ◽  
pp. eaaw5912 ◽  
Author(s):  
Evan Pretti ◽  
Hasan Zerze ◽  
Minseok Song ◽  
Yajun Ding ◽  
Runfang Mao ◽  
...  

Nucleation and growth of crystalline phases play an important role in a variety of physical phenomena, ranging from freezing of liquids to assembly of colloidal particles. Understanding these processes in the context of colloidal crystallization is of great importance for predicting and controlling the structures produced. In many systems, crystallites that nucleate have structures differing from those expected from bulk equilibrium thermodynamic considerations, and this is often attributed to kinetic effects. In this work, we consider the self-assembly of a binary mixture of colloids in two dimensions, which exhibits a structural transformation from a non–close-packed to a close-packed lattice during crystal growth. We show that this transformation is thermodynamically driven, resulting from size dependence of the relative free energy between the two structures. We demonstrate that structural selection can be entirely thermodynamic, in contrast to previously considered effects involving growth kinetics or interaction with the surrounding fluid phase.


2016 ◽  
Vol 110 (3) ◽  
pp. 323a
Author(s):  
Eduardo R. Cruz-Chu ◽  
Konstantinos Gkagkas ◽  
Frauke Graeter

Soft Matter ◽  
2017 ◽  
Vol 13 (1) ◽  
pp. 222-229 ◽  
Author(s):  
Arash Nikoubashman

The self-assembly of amphiphilic Janus colloids in microfluidic channels under Poiseuille flow is studied using computer simulations. The aggregates grow in the weakly sheared channel center, whereas a distinct cluster breakup occurs in strongly sheared channel regions.


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