Cladistic analysis of the Brazilian troglobitic harvestmen genus Iandumoema Pinto-da-Rocha (Opiliones : Gonyleptidae) with the description of three new species: a brief exercise over the use of troglomorphisms in cladistic analysis

From an ecological and evolutionary standpoint, troglobitic organisms are of special interest because they have evolved in, and are restricted to, the subterranean environment. Iandumoema Pinto-da-Rocha, 1997 stands out for being the only Brazilian harvestmen genus with more than one troglobitic species, with three species described from caves in Minas Gerais state. Traditionally, testing the monophyly of troglobitic groups is more challenging than testing groups that do not include troglobites. Many of their shared features might be the result of convergence or parallelism imposed by the cave environment, such as the absence of light, limited and infrequent availability of food resources and low population density, among others. In the case of Iandumoema, this becomes even more difficult because the genus is currently included in the species-rich and polyphyletic subfamily Pachylinae. This study tested the monophyly of this troglobitic genus and proposed the first phylogenetic hypothesis for Iandumoema based on cladistic analysis using morphological data. The analysis included all described species of Iandumoema and three new troglobitic species: I. cuca, sp. nov. (type locality: Itacarambi, Gruta da Água do João Ferreira); I. gollum, sp. nov. (type locality: Presidente Juscelino, Lapa D’Água); and I. stygia, sp. nov. (type locality: Montes Claros, Gruta do Cedro). The matrix comprises 79 characters and 28 terminal taxa: six species of Iandumoema; 14 of Pachylinae; six from other Gonyleptidae subfamilies; one species of Cosmetidae; and one of Metasarcidae. The cladistic analysis resulted in one parsimonious tree (339 steps, consistency index = 0.35, retention index = 0.56). Iandumoema is a monophyletic and well supported genus, nestled among Brazilian ‘Pachylinae’. Three new species are described and an identification key and ecological remarks for all six species of the genus Iandumoema is provided.

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Phylogenetic relationships of the genus Mischonyx Bertkau, 1880, with taxonomic changes and three new species description (Opiliones: Gonyleptidae)

PeerJ ◽

10.7717/peerj.11682 ◽

2021 ◽

Vol 9 ◽

pp. e11682

Author(s):

Caio Gueratto ◽

Alípio Benedetti ◽

Ricardo Pinto-da-Rocha

Keyword(s):

New Species ◽

Rio De Janeiro ◽

Sao Paulo ◽

Junior Synonym ◽

Type Locality ◽

São Paulo ◽

Phylogenetic Hypothesis ◽

Areas Of Endemism ◽

Taxonomic Changes ◽

Three New Species

The type species of Mischonyx Bertkau 1880, Mischonyx squalidus, was described based on a juvenile. The holotype is lost. Based on a revision of publications, the genus includes 12 species, all in Brazil. The objectives of this research are: to propose a phylogenetic hypothesis for Mischonyx based on Total Evidence (TE); propose taxonomic changes based on the phylogeny; and analyze the phylogenetic hypothesis biogeographically. Using the exemplar approach to taxon selection, we studied 54 specimens, 15 outgroups and 39 ingroup taxa using seven molecular markers (28S, 12S and 16S ribosomal genes, citochrome oxidase subunit I gene, carbamoyl-phosphate synthetase gene, internal transcribed spacer subunit 2 and histone H3 gene), totaling 3,742 bp, and 128 morphological characters. We analyzed the dataset under three optimality criteria: Maximum likelihood (ML), Maximum parsimony (MP) and Bayesian. We discuss the transformation of character states throughout the phylogeny, the different phylogenetic hypotheses using different datasets and the congruence of evidence between the clades obtained by the phylogenetic analysis and the biogeographical hypothesis for the Atlantic Forest areas of endemism. We estimate that Mischonyx clade diverged 50.53 Mya, and inside the genus there are two major clades. One of them cointains species from Paraná, Santa Catarina, South of São Paulo and Serra do Mar Areas of Endemism and the other has species from Espinhaço, Bocaina, South coast of Rio de Janeiro and Serra dos Órgãos Areas of Endemism. The first split inside these two clades occurred at 48.94 and 44.80 Mya, respectively. We describe three new species from Brazil: Mischonyx minimus sp. nov. (type locality: Petrópolis, Rio de Janeiro), Mischonyx intervalensis sp. nov. (type locality: Ribeirão Grande, São Paulo) and Mischonyx tinguaensis sp. nov (type locality: Nova Iguaçu, Rio de Janeiro). The genus Urodiabunus Mello-Leitão, 1935 is considered a junior synonym of Mischonyx. Weyhia spinifrons Mello-Leitão, 1923; Weyhia clavifemur Mello-Leitão, 1927 and Geraeocormobius reitzi Vasconcelos, 2005 were transferred to Mischonyx. Mischonyx cuspidatus (Roewer, 1913) is a junior synonym of M. squalidus Bertkau, 1880. In the results of the phylogenetic analyses, Gonyleptes antiquus Mello-Leitão, 1934 (former Mischonyx antiquus) does not belong in Mischonyx and its original combination is re-established. As it is now defined, Mischonyx comprises 17 species, with seven new combinations.

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Remarkable sexual dimorphism, rarity and cryptic species: a revision of the ‘aegrota species group’ of the Neotropical butterfly genus Caeruleuptychia with the description of three new species (Lepidoptera, Nymphalidae, Satyrinae)

Insect Systematics & Evolution ◽

10.1163/1876312x-00002167 ◽

2018 ◽

Vol 49 (2) ◽

pp. 130-182 ◽

Cited By ~ 7

Author(s):

Shinichi Nakahara ◽

Thamara Zacca ◽

Blanca Huertas ◽

Andrew F. E. Neild ◽

Jason P. W. Hall ◽

...

Keyword(s):

New Species ◽

Sexual Dimorphism ◽

Cryptic Species ◽

Molecular Data ◽

Species Group ◽

Morphological Data ◽

Phylogenetic Hypothesis ◽

Morphological And Molecular Data ◽

Three New Species ◽

First Time

The ‘aegrota species group’ of the Neotropical nymphalid genus Caeruleuptychia Forster, 1964, in addition to three other superficially similar, enigmatic species in the genus, are revised. A lectotype is designated for Euptychia aegrota Butler, 1867, E. aetherialis Butler, 1877 stat. rev., E. helios Weymer, 1911 and E. pilata Butler, 1867, and C. aetherialis is resurrected from its synonymy with C. aegrota. Caeruleuptychia helios caelestissima Brévignon, 2010, syn. nov., and Magneuptychia keltoumae Brévignon & Benmesbah, 2012, syn. nov. are both regarded as junior subjective synonyms of C. helios (Weymer, 1911), as a result of the discovery and first illustration of the female of this taxon. The female of C. aegrota is also described and illustrated for the first time, and three new species, C. trembathi Willmott, Nakahara, Hall & Neild, sp. nov., C. scripta Nakahara, Zacca & Huertas, sp. nov., and C. maryzenderae Lamas & Nakahara, sp. nov. are described and named. We analyze morphological and molecular data separately, in addition to combining morphological data with molecular data, to provide the first phylogenetic hypothesis for the taxa treated in this revision.

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Revision of Nanophareus, a mysterious harvestman genus from Chile, with descriptions of three new species (Opiliones: Laniatores: Gonyleptidae)

Zootaxa ◽

10.11646/zootaxa.3579.1.2 ◽

2012 ◽

Vol 3579 (1) ◽

pp. 37 ◽

Cited By ~ 6

Author(s):

MARCOS RYOTARO HARA ◽

RICARDO PINTO-DA-ROCHA ◽

ADRIANO BRILHANTE KURY

Keyword(s):

New Species ◽

Male Genitalia ◽

Cladistic Analysis ◽

Lateral View ◽

Type Locality ◽

Data Matrix ◽

Lateral Margin ◽

Three New Species ◽

Tibia Length

The Chilean genus Nanophareus Roewer, 1929 is revised and three new species are described: N. araucanus sp. nov. (typelocality: Parque Nacional La Campana, Valparaíso, Chile); N. bipartitus sp. nov. (type locality: Parque Nacional La Cam-pana, Valparaíso, Chile); N. bosqenublado sp. nov. (type locality: Parque Nacional Fray Jorge, Coquimbo, Chile). Thetype species, N. palpalis Roewer, 1929, is redescribed and a lectotype is designated. A cladistic analysis was performedusing these three new species plus N. palpalis and 14 more laniatorid species, and a data matrix of 72 characters: Sevenfrom the ocularium, 22 from the dorsal scutum, one from the venter, one from the chelicera, eight from the pedipalp, 24from male legs, and nine from male genitalia. Two equally most parsimonious trees were found (L = 210; C.I. = 0.41; R.I.= 0.51). Nanophareus was recovered as nested within a paraphyletic subfamily Pachylinae. The genus Nanophareus wasfound to be monophyletic based on the following exclusive synapomorphies: An external row of enlarged tubercles in-serted among small ones on lateral margin of the dorsal scutum (innapplicable in N. bosqenublado); the ventro-basal mar-gin of pedipalpal tibia curved 90 degrees in lateral view; and retrolateral seta of the pedipalpal tibia with a socket apically bifid (socket and seta longer than pedipalpal tibia length).

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A cladistic analysis of the genera of the tribe Entimini (Coleoptera, Curculionidae), with description of a new genus and species from the Amazonian Region

Zootaxa ◽

10.11646/zootaxa.1053.1.1 ◽

2005 ◽

Vol 1053 (1) ◽

pp. 1 ◽

Cited By ~ 8

Author(s):

SERGIO ANTONIO VANIN ◽

FABIO GAIGER

Keyword(s):

New Species ◽

New Genus ◽

Cladistic Analysis ◽

Identification Key ◽

Type Locality ◽

Phylogenetic Hypothesis ◽

New Genus And Species ◽

Representative Species ◽

Amazonian Region ◽

Anterior Angle

A new genus and species of the weevil tribe Entimini, Nasocomptus obyberaba gen. nov. and sp. nov., are described from the southwestern Amazonian Region (type locality: Brazil, Rondonia, Ouro Preto do Oeste). A cladistic analysis was carried out among representative species of most of the Neotropical genera, including Nasocomptus gen. nov., to provide a phylogenetic hypothesis for the tribe. A single most parsimonious cladogram was obtained: (Entimus (Nasocomptus ((Polyteles, Phaedropus) (Rhigus, Cydianerus)))). An identification key for the genera of Neotropical Entimini (except Trachyus) is furnished. The new genus is easily distinguished by two outstanding autapomorphies: anterior angle of rostrum prominent and spiked in males, and styli of female coxites ventral and pre-apical. Color photographs of the habitus of the new species and outline illustrations of structures used in the cladistic analysis are presented.

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Taxonomic revision of species of Haematoloechus Looss, 1899 (Digenea: Plagiorchioidea), with molecular phylogenetic analysis and the description of three new species from Mexico

Zootaxa ◽

10.11646/zootaxa.4526.3.1 ◽

2018 ◽

Vol 4526 (3) ◽

pp. 251 ◽

Cited By ~ 2

Author(s):

VIRGINIA LEÓN-RÈGAGNON ◽

JANET TOPAN

Keyword(s):

New Species ◽

Taxonomic Revision ◽

Morphological Characters ◽

Nomen Nudum ◽

Phylogenetic Hypothesis ◽

Molecular Phylogenetic ◽

Phylogenetic Hypotheses ◽

Three New Species ◽

Host Parasite ◽

Species Inquirendae

Lung flukes of the genus Haematoloechus Looss, 1899 are common parasites of anurans worldwide, but the taxonomy of the group has been confusing. In this taxonomic revision, 89 species of Haematoloechus (= Pneumonoeces Looss, 1902, Ostioloides Odening, 1960, Ostiolum Pratt, 1903, Skrjabinoeces Sudarikov, 1950, Neohaematoloechus Odening, 1960, Metahaematoloechus Yamaguti, 1971) are listed. Of these, 70 are considered valid, three are species inquirendae (H. legrandi Mañé–Garzón & Gil, 1959, H. latoricensis Kozák, 1968 & H. vitelloconfluentum (Rai, 1962) Saeed, Al–Barwari & Al-Harmni, 2007), one is a nomen nudum H. sudarikovi Belouss, 1962, 14 are junior synonyms and one belongs to Ostioloides. This publication also describes three new species, H. occidentalis n. sp., H. veracruzanus n. sp. and H. mexicanus n. sp., parasitizing species of Rana Linnaeus in Mexico and redescribes Haematoloechus caballeroi (Skrjabin & Antipin, 1962) Yamaguti, 1971. The phylogenetic hypotheses based on sequences of mitochondrial and ribosomal DNA of Haematoloechus spp. show that genera proposed on the basis of morphological characters are not supported. The host records for species of Haematoloechus, together with the phylogenetic hypothesis of the genus, suggest that this host-parasite association predates the ranid diversification in the Cretaceous.

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Salticidae (Arachnida, Araneae) of Thailand: new species and records of Epeus Peckham & Peckham, 1886 and Ptocasius Simon, 1885

PeerJ ◽

10.7717/peerj.9352 ◽

2020 ◽

Vol 8 ◽

pp. e9352

Author(s):

Barbara Maria Patoleta ◽

Joanna Gardzińska ◽

Marek Żabka

Keyword(s):

New Species ◽

Natural History ◽

Morphological Characters ◽

Natural History Museum ◽

Morphological Data ◽

History Museum ◽

Two New Species ◽

New Material ◽

Hungarian Natural History Museum ◽

Three New Species

The study is based on new material from the collections of the Naturalis Biodiversity Centre in Leiden (RNHM) and the Hungarian Natural History Museum (HNHM) and addresses issues in two genera: Epeus Peckham & Peckham, 1886 and Ptocasius Simon, 1885 from Thailand. Both genera are of Asian/Indomalayan origin, the latter with a diversity hotspot in the subtropical valleys of the Himalayas. Based on morphological data, we propose three new species of Epeus (Epeus daiqini sp. nov. (♂♀), Epeus pallidus sp. nov. (♀), Epeus szirakii sp. nov. (♀)) and two new species of Ptacasius (Ptocasius metzneri sp. nov. (♂♀) and Ptocasius sakaerat sp. nov. (♀)). Additionally, we redescribed E. tener (Simon, 1877) and added photographs of morphological characters. The genus Ptocasius is redefined due to the inclusion of 37 species, previously included in Yaginumaella Prószyński, 1979. Relationships and distribution of both genera are discussed in reference to molecular, morphological and distributional data, published by other authors in recent years.

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Morphological and phylogenetic study of the Western Atlantic Crepidula plana complex (Caenogastropoda, Calyptraeidae), with description of three new species from Brazil

Zootaxa ◽

10.11646/zootaxa.1112.1.1 ◽

2006 ◽

Vol 1112 (1) ◽

pp. 1 ◽

Cited By ~ 6

Author(s):

LUIZ RICARDO L. SIMONE

Keyword(s):

New Species ◽

Morphological Data ◽

Phylogenetic Study ◽

Good Resolution ◽

Western Atlantic ◽

Informal Group ◽

Phylogenetic Studies ◽

History Of ◽

Three New Species ◽

Good Number

A detailed morphological study was performed in the following species of Crepidula: 1) C. margarita new species from Venezuela; 2) C. plana Say, 1822; 3) C. atrasolea Collin, 2000; 4) C. depressa Say, 1822, from Florida, USA; 5) C. pyguaia, new species from Santa Catarina coast, Brazil; 6) C. carioca, new species from Rio de Janeiro coast, Brazil. Additionally, five other species anatomically studied in Simone (2002) were also included: 7) C. argentina Simone, Pastorino & Penchaszadeh, 2000, from Argentina; 8) C. glauca Say, 1822, from Venezuela; 9) C. fornicata (Linné, 1758), from Mediterranean and Florida; 10) C. protea Orbigny, from S.E. Brazil; 11) C. aff. plana, here described as C. intratesta new species, from S.E. Brazil; 12) C. cachimilla Cledón Simone & Penchaszadeh, 2004, from Patagonia. The 46 characters (106 states) for these species were phylogenetically analyzed and a single cladogram was obtained (length: 93, CI: 65; RI: 64) as follows: (Crepidula cachimilla (C. argentina ((C. carioca C. pyguaia) ((C. fornicata (C. intratesta C. protea)) ((C. glauca C. margarita) (C. plana (C. atrasolea C. depressa))))))). Two outgroups were used: Bostrycapulus aculeatus (Gmelin, 1791), which most authors consider a Crepidula (operationally analyzed as part of the ingroup), and the remaining calyptraeoideans studied by the author. The monophyly of the ingroup is confirmed, supported by 25 morphological synapomorphies. Although the ingroup is fully resolved, no clades are formally named, because the phylogeny is still considered provisional. Most studied species belong to an informal group called “Crepidula plana-complex”, but it is not monophyletic, since C. fornicata, which does not belong to this complex, is part of the ingroup. This study demonstrates that detailed morphological data are useful in phylogenetic studies even at the level of closely related/sibling species, resulting in cladogram with good resolution and a good number of shared, analyzable characters. A biogeographic analysis is also performed considering the distribution of each species under the light of the obtained cladogram, a clear ascension from south to north is the main pattern of the evolutionary history of these species. Further comments on the systematics of Crepidula aplysioides Reeve and C. convexa Say is also performed.

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The genus Cloeodes (Ephemeroptera: Baetidae) in Argentina with new generic synonymy and new species

Zootaxa ◽

10.11646/zootaxa.1727.1.1 ◽

2008 ◽

Vol 1727 (1) ◽

pp. 1 ◽

Cited By ~ 7

Author(s):

CAROLINA NIETO ◽

BARTON RICHARD

Keyword(s):

New Species ◽

Cladistic Analysis ◽

South American ◽

Monotypic Genus ◽

South American Species ◽

Three New Species

Three new species of Cloeodes are described from Argentina (C. barituensis, C. espinillo and C. opacus), based on nymphs and from adults for the first two species. Two species, C. stelzneri and C. nocturnus, are proposed as nomen dubia. The only other species from Argentina, C. penai, is revised. The validity of the monotypic genus Bernerius is analyzed. A cladistic analysis including five species of the genus Cloeodes and Bernerius is presented and the synonymy of the latter is confirmed. A key for South American species of Cloeodes is presented.

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Integrative approach reveals underestimated Peyssonneliales diversity in Brazil: registering the first occurrence of Ramicrusta and Incendia, with the description of three new species

Phytotaxa ◽

10.11646/phytotaxa.439.1.2 ◽

2020 ◽

Vol 439 (1) ◽

pp. 39-55

Author(s):

EDILENE MARIA DOS SANTOS PESTANA ◽

GOIA DE MATTOS LYRA ◽

GABRIEL DO NASCIMENTO SANTOS ◽

CIBELE CONCEIÇÃO DOS SANTOS ◽

VALÉRIA CASSANO ◽

...

Keyword(s):

New Species ◽

Original Description ◽

Morphological Characters ◽

Type Locality ◽

Integrative Approach ◽

Brazilian Coast ◽

Monophyletic Clade ◽

Sister Relationship ◽

First Occurrence ◽

Three New Species

Peyssonneliaceae represents a monophyletic clade of red encrusting algae classified Peyssonneliales. Molecular analyses have been important for revealing unknown diversity in this family, which includes small, cryptic organisms, frequently distinguished solely by discrete anatomical characters. Brazil however, remains virtually unknown. To assess this diversity, phylogenetic and barcoding analyses using rbcL, COI-5P and SSU data, as well as morpho-anatomical analyses were performed. Here we report the first occurrence of two genera on the Brazilian coast: Ramicrusta and Incendia, and describe three new species: Ramicrusta fujiiana sp. nov., Ramicrusta paradoxa sp. nov. and Incendia yoneshigueana sp. nov. Ramicrusta was resolved as a monophyletic clade in the three reconstructed phylogenies, and had congruent topologies. In the rbcL phylogeny, Ramicrusta fujiiana formed a well-supported clade sister to a well-supported clade including R. aranea (Vanuatu, type locality) and R. textilis (Jamaica, type locality). Morphological characters of R. paradoxa are not in agreement with the original description of the genus. Therefore, we present an updated and broader concept of Ramicrusta. Incendia was resolved as a monophyletic clade with full support for rbcL. Incendia yoneshigueana is in a sister relationship with I. glabra (Vanuatu, type locality). This study extends the distributions of Ramicrusta and Incendia, proposes three new species, and confirms the effectiveness of rbcL, COI-5P and SSU in inferring phylogenetic relationships and delimiting species in the Peyssonneliales. The integrative approach established clear taxonomic concepts for the studied genera and species, and identified useful characters for genera delimitation in Peyssonneliaceae.

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Revision of the genus Epexochus Reitter, with description of three new species (Coleoptera: Curculionidae: Lixinae: Cleonini)

Zootaxa ◽

10.11646/zootaxa.2011.1.2 ◽

2009 ◽

Vol 2011 (1) ◽

pp. 47-68

Author(s):

MASSIMO MEREGALL ◽

FABIO TALAMELLI

Keyword(s):

New Species ◽

Single Species ◽

Morphological Characters ◽

Type Locality ◽

Western China ◽

Large Size ◽

Colour Variant ◽

The Status ◽

Three New Species ◽

North Western

The genus Epexochus Reitter is revised, its morphological characters are defined and the differences from the most closely related genera, Leucochromus Motschulsky and Eurycleonus Bedel, are outlined. All the populations of Epexochus from Kazakhstan and north-western China (Xinjiang) are referred to a single species, E. lehmanni (Ménétries). The status of Exochus latus Chevrolat is discussed and its name is formally synonymised with lehmanni. According to Art. 45.6.4.1 of the ICZN (1999), the name lehmanni var. consobrinus Faust, originally proposed for a colour variant and misidentified by Ter-Minasyan, is deemed to be subspecific and thus a synonym of lehmanni. Three new species are described in the genus: E. korotyaevi sp. n. (type locality: southern Tajikistan, Shaar-tuz region), characterised by the pronotum curved towards the elytra and by slender, lanceolate scales; E. voriseki sp. n. (type locality: central Uzbekistan, Gazli), characterised by small size, only slightly convex elytra and long hair-like setae, and E. mongolicus sp. n. (type locality: western Mongolia, Kobdoskij Aimak), characterised by large size, convex elytra with flat intervals and an elongate lamella of the aedeagus.

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