Airborne bacteria in show caves from Southern Spain

This work presents a study on the airborne bacteria recorded in three Andalusian show caves, subjected to different managements. The main differences within the caves were the absence of lighting and phototrophic biofilms in Cueva de Ardales, the periodic maintenance and low occurrence of phototrophic biofilms in Gruta de las Maravillas, and the abundance of phototrophic biofilms in speleothems and walls in Cueva del Tesoro. These factors conditioned the diversity of bacteria in the caves and therefore there are large differences among the CFU m-3, determined using a suction impact collector, equipment widely used in aerobiological studies. The study of the bacterial diversity, inside and outside the caves, indicates that the air is mostly populated by bacteria thriving in the subterranean environment. In addition, the diversity seems to be related with the presence of abundant phototrophic biofilms, but not with the number of visitors received by each cave.

Comparative development and ocular histology between epigean and subterranean salamanders (Eurycea) from central Texas

The salamander clade Eurycea from the karst regions of central Texas provides an ideal platform for comparing divergent nervous and sensory systems since some species exhibit extreme phenotypes thought to be associated with inhabiting a subterranean environment, including highly reduced eyes, while others retain an ancestral ocular phenotype appropriate for life above ground. We describe ocular morphology, comparing three salamander species representing two phenotypes—the surface-dwelling Barton Springs salamander (E. sosorum) and San Marcos salamander (E. nana) and the obligate subterranean Texas blind salamander (E. rathbuni) - in terms of structure and size of their eyes. Eyes were examined using confocal microscopy and measurements were made using ImageJ. Statistical analysis of data was carried out using R. We also provide a developmental series and track eye development and immunolocalization of Pax6 in E. sosorum and E. rathbuni. Adult histology of the surface-dwelling San Marcos salamander (E. nana) shows similarities to E. sosorum. The eyes of adults of the epigean species E. nana and E. sosorum appear fully developed with all the histological features of a fully functional eye. In contrast, the eyes of E. rathbuni adults have fewer layers, lack lenses and other features associated with vision as has been reported previously. However, in early developmental stages eye morphology did not differ significantly between E. rathbuni and E. sosorum. Parallel development is observed between the two phenotypes in terms of morphology; however, Pax6 labeling seems to decrease in the latter stages of development in E.rathbuni. We test for immunolabeling of the visual pigment proteins opsin and rhodopsin and observe immunolocalization around photoreceptor disks in E. nana and E. sosorum, but not in the subterranean E. rathbuni. Our results from examining developing salamanders suggest a combination of underdevelopment and degeneration contribute to the reduced eyes of adult E. rathbuni.

Mesofauna at the Soil-Scree Interface in a Deep Karst Environment

The community patterns of Collembola (Hexapoda) were studied at two sites along a microclimatically inversed scree slope in a deep karst valley in the Western Carpathians, Slovakia, in warm and cold periods of the year, respectively. Significantly lower average temperatures in the scree profile were noted at the gorge bottom in both periods, meaning that the site in the lower part of the scree, near the bank of creek, was considerably colder and wetter compared to the warmer and drier site at upper part of the scree slope. Relatively high diversity of Collembola was observed at two fieldwork scree sites, where cold-adapted species, considered climatic relicts, showed considerable abundance. The gorge bottom, with a cold and wet microclimate and high carbon content even in the deeper MSS horizons, provided suitable environmental conditions for numerous psychrophilic and subterranean species. Ecological groups such as trogloxenes and subtroglophiles showed decreasing trends of abundance with depth, in contrast to eutroglophiles and a troglobiont showing an opposite distributional pattern at scree sites in both periods. Our study documented that in terms of soil and subterranean mesofauna, colluvial screes of deep karst gorges represent (1) a transition zone between the surface and the deep subterranean environment, and (2) important climate change refugia.

Three new subterranean species of Baezia (Curculionidae, Molytinae) for the Canary Islands

The genus Baezia Alonso-Zarazaga & García, 1999 is endemic to the Canary Islands, where four species were known to date. Based on morphological evidence, three new species of Baezia are described in this study: Baezia aranfaybo García & López, sp. nov. from El Hierro island, and Baezia madai García & Oromí sp. nov. and Baezia tizziri García & Andújar, sp. nov. from La Palma island. Notes on their biology, habitat, and distribution are presented. The number of taxa in this endemic Canarian genus increases to seven eyeless species. One species has been reported from the soil (endogean environment), with the other six associated with caves and the mesovoid shallow substratum (hypogean or subterranean environment). Frequent association with the presence of roots suggests that species of Baezia may inhabit the continuum represented by the endogean and hypogean environments. Identification key to the seven species are provided.

Arinosaster patriciae (Porifera, Demospongiae): new genus and species and the second record of a cave freshwater sponge from Brazil

Arinosaster patriciae gen. nov. et sp. nov. is the second continental sponge registered for a subterranean environment (cave habitat) in Brazil and the Neotropical Region. The sponges were recorded and collected in a 5m depth technical dive in a sinkhole of Rio Claro, tributary of Rio Arinos, Tapajós system, Amazon Basin (-13.8170386, -56.6914225) at the locality of Sumidouro do Rio Claro, Municipality of Diamantino, state of Mato Grosso, central western Brazil. The cave is placed in sandstone rocks of the Parecis Group (Upper Cretaceous). “In situ” photographs of colonies, of living specimens, SEM illustrations of dissociated spicules as well as of the skeletal structure, are presented. The occurrence of euaster microscleres of the type spherasters are for the first time reported for continental sponges but, also new, is the occurrence of spongin fibers, composing with fibers of silicious spicules in the skeletal arrangement. The absence of gemmules in the studied material and the fact that new specimens remain undetected call for the proposition of a new monospecific genus to be retained as Incertae Sedis until new and gemmuliferous colonies are found.

Reduced Oxygen as an Environmental Pressure in the Evolution of the Blind Mexican Cavefish

Extreme environmental features can drive the evolution of extreme phenotypes. Over the course of evolution, certain environmental changes may be so drastic that they lead to extinction. Conversely, if an organism adapts to harsh environmental changes, the adaptations may permit expansion of a novel niche. The interaction between environmental stressors and adaptive changes is well-illustrated by the blind Mexican cavefish, Astyanaxmexicanus, which has recurrently adapted to the stark subterranean environment. The transition from terrestrial rivers and streams (occupied by extant surface morphs of the same species) to the cave has been accompanied by the resorption of eyes, diminished pigmentation and reduced metabolism in cave-dwelling morphs. The principal features of caves most often associated with evolution of these common cave features are the absence of light and limited nutrition. However, a putatively essential cave feature that has received less attention is the frequently low concentration of oxygen within natural karst environments. Here, we review the potential role of limited oxygen as a critical environmental feature of caves in the Sierra de El Abra. Additionally, we review evidence that Astyanax cavefish may have evolved adaptive features enabling them to thrive in lower oxygen compared to their surface-dwelling counterparts.

Dynamic Information Needs Analysis: Understanding User Information Needs in Subterranean Warfare

In this practice-oriented paper for human factors research, we describe our experiences piloting an exercise to understand how a moment-by-moment input device can be utilized to help understand soldiers information needs while conducting subterranean (sub-t) warfare and facilitate development of Augmented Reality (AR) displays for sub-t use. We created a sub-t environment using the Unity game engine and utilized students as subjects to facilitate experiment setup and validation. Little research is being done on what information soldiers need in a subterranean environment. Here we begin to investigate these information needs.

Subterranean and Anchialine Waters

Crustaceans have successfully colonized the subterranean habitat, and many have become obligate inhabitants, occurring virtually everywhere there are interconnected voids underground. With the exception of most oniscidean isopods and a few talitrid amphipods, subterranean crustaceans inhabit water (stygobionts), where they dominate the stygofauna both in biomass and diversity of species. Four major taxonomic groups predominate: amphipods, isopods, copepods, and ostracods. Although most higher crustacean taxa have representatives in both epigean and subterranean habitats, some groups such as remipedes, thermosbaenaceans, spelaeogriphaceans, bathynellaceans, mystacocarids, and gelyelloid copepods are known only from the subterranean environment. Subterranean habitats vary physically and range from organically rich shallow habitats around seeps to cave systems more than a kilometer deep. Water quality, which can range from fresh to marine to hypersaline, static to flowing, and oxic to suboxic, impacts species distribution. Dispersal patterns in subterranean crustaceans are also diverse. Freshwater stygobiont crustaceans have narrow endemic ranges, and their dispersal is limited by saltwater. The distribution of several freshwater taxa might reflect the movement of tectonic plates. The extraordinarily diverse anchialine fauna, initially distributed along the Tethyan coast, was likely spread by vicariance due to movement of tectonic plates. Originating from epigean ancestors, many stygobionts have a marine origin. While the existence of preadaptations does not necessarily guarantee successful colonization of the subterranean habitat, a suite of characteristics is frequently observed in subterranean crustaceans, with most being weakly chitinized, lacking or with reduced eyes and pigments, and enhanced non-optic sense organs. Metabolic rates tend to be lower than in epigean crustaceans. Limited evidence indicates subterranean crustaceans are longer lived with lower reproductive potential. These adaptations make subterranean crustacean populations particularly vulnerable to anthropogenic impacts. The morphological, physiological, and life history adaptations to a subterranean existence are most likely common responses to the physical environment of each subterranean ecosystem. Extensive biodiversity and phylogeography studies are still required, and there is a pressing need to comprehend the functional role of stygofauna in subterranean waters.