Conclusive determination of ethynyl radical hydrogen abstraction energetics and kinetics*

2020 ◽  
Vol 118 (19-20) ◽  
pp. e1769214
Author(s):  
Michael C. Bowman ◽  
Alexandra D. Burke ◽  
Justin M. Turney ◽  
Henry F. Schaefer III
2004 ◽  
Vol 6 (16) ◽  
pp. 4111 ◽  
Author(s):  
Hue Minh Thi Nguyen ◽  
Shaun Avondale Carl ◽  
Jozef Peeters ◽  
Minh Tho Nguyen

1993 ◽  
Vol 71 (1) ◽  
pp. 135-140 ◽  
Author(s):  
J. S. Francisco ◽  
N. Mina-Camilde

Theoretical barriers and reaction energetics were determined using ab initio calculations at the PMP4/6-311 + +G** level with UMP2/6-311G** optimized geometries for hydrogen abstraction reactions of HFCO and HClCO by fluorine and chlorine atoms. The largest barriers are predicted for fluorine and chlorine atom abstractions of hydrogen from HFCO. Fluorine and chlorine atom abstractions of hydrogen from HClCO are predicted to be barrierless. The predicted barrier for fluorine atom abstraction of hydrogen from HFCO is calculated to be 1.3 kcal mol−1 and is in good agreement with the experimental value of 1.8 ± 0.4 kcal mol−1.


2019 ◽  
Vol 20 (20) ◽  
pp. 5018 ◽  
Author(s):  
Maekawa ◽  
Jinnoh ◽  
Matsumoto ◽  
Narita ◽  
Mashima ◽  
...  

: Niemann–Pick disease type C (NPC) is an autosomal recessive disorder caused by the mutation of cholesterol-transporting proteins. In addition, early treatment is important for good prognosis of this disease because of the progressive neurodegeneration. However, the diagnosis of this disease is difficult due to a variety of clinical spectrum. Lysosphingomyelin-509, which is one of the most useful biomarkers for NPC, was applied for the rapid and easy detection of NPC. The fact that its chemical structure was unknown until recently implicates the unrevealed pathophysiology and molecular mechanisms of NPC. In this study, we aimed to elucidate the structure of lysosphingomyelin-509 by various mass spectrometric techniques. As our identification strategy, we adopted analytical and organic chemistry approaches to the serum of patients with NPC. Chemical derivatization and hydrogen abstraction dissociation–tandem mass spectrometry were used for the determination of function groups and partial structure, respectively. As a result, we revealed the exact structure of lysosphingomyelin-509 as N-acylated and O-phosphocholine adducted serine. Additionally, we found that a group of metabolites with N-acyl groups were increased considerably in the serum/plasma of patients with NPC as compared to that of other groups using targeted lipidomics analysis. Our techniques were useful for the identification of lysosphingomyelin-509.


2006 ◽  
Vol 110 (33) ◽  
pp. 10155-10162 ◽  
Author(s):  
Víctor H. Uc ◽  
J. Raúl Alvarez-Idaboy ◽  
Annia Galano ◽  
Isidoro García-Cruz ◽  
Annik Vivier-Bunge

It has been shown that ethynyl radicals may be satisfactorily generated by the photolysis, at 253.7 nm, of bromoacetylene in the presence of nitric oxide. Acetylene and butadiyne are primary products, being formed exclusively by the reactions C 2 H . + C 2 HBr→C 2 H 2 + C 2 Br . , C 2 H . + C 2 HBr→C 4 H 2 + Br . . Nitric oxide decreases the rates of formation of both products, indicating the effective scavenging of ethynyl radicals by this compound. Addition of an inert gas (nitrogen or carbon dioxide) increases the ratio [C 4 H 2 ]/[C 2 H 2 ] from 3.5 (no inert gas) to 7 (total pressure 80 kPa (1 Pa = 1 N m -2 )), the ratio thereafter remaining constant. The most obvious explanation for this behaviour is that, during photolysis, ethynyl radicals produced in the absence of inert gas have excess translational energy and, probably, enhanced reactivity. With increasing inert gas pressure, fewer ‘hot’ radicals react and the change in the ratio [C 4 H 2 ]/[C 2 H 2 ] reflects the change in selectivity of ‘thermalized’ ethynyl radicals. On account of this, investigations of the reactions of C 2 H . with added hydrocarbons were carried out with a standard 1:1:100 bromoacetylene-nitric oxide-nitrogen mixture. Results obtained with added alkanes (methane, ethane, 2,2 dimethylpropane) showed that ethynyl radicals abstract hydrogen atoms to form acetylene: C 2 H . + RH→C 2 H 2 + R . , The relative importance of reactions (1) and (2) has been estimated and values for k 1 / k 2 of 0.016 ± 0.005, 0.54 ± 0.04 and 0 .91 ± 0.04 have been obtained for methane, and ethane 2,2-dimethylpropane respectively. The ratio k 1 / k 2 did not vary over the temperature range 298 to 478 K in the case of 2,2-dimethylpropane but with methane, values for E 1 — E 2 and A 2 / A 1 of 12.54 ± 1.27 kJ mol -1 and 0.54 ± 0.25, respectively, were obtained. Studies of the reactions of ethynyl radicals with alkynes (acetylene, butadiyne and propyne) have shown that the radicals abstract hydrogen atoms (to form acetylene), displace hydrogen atoms (to form a di- or triyne) and, in the case of propyne, displace a methyl radical. For propyne, the relevant reactions are C 2 H . + C 3 H 4 →C 2 H 2 + C 3 H 3 . , C 2 H . + C 3 H 4 →C 4 H 2 + CH 3 . , C 2 H . + C 3 H 4 →C 5 H 4 + H . , and Values of 25 ± 3, 5 ± 2, 9.9 ± 1 and 23 ± 3 at 298 K have been obtained for k 7 / k 9 , k 4 / k 9 , k 8 / k 9 and k 2 / k 9 respectively. In the presence of butadiyne, acetylene and hexatriyne are formed as primary products. Acetylene is formed by reactions (4) and (13), C 2 H . +C 4 H 2 → C 2 H 2 + C 4 H . , whilst hexatriyne is formed by the displacement reaction (14) C 2 H . + C 4 H 2 →C 6 H 2 +H . . Kinetic measurements have shown that at 298 K k 4 / k 14 =0.6 ± 0.1 and k 13 / k 14 = 1.1 ± 0.2. Addition of acetylene-d 2 to bromoacetylene-nitrogen mixtures yields acetylene-d 1 and butadiyne-d 1 C 2 H . + C 2 D 2 → C 2 HD +C 2 D . , C 2 H . + C 2 D 2 → C 4 HD + D . . The rate-constant ratios k 12 / k 11 and k 2 / k 12 are 2 .8 ± 2.5 and 1.5 ± 0.3 respectively. This work thus indicates that ethynyl radical addition-elimination reactions, leading to polyalkynes, occur to a comparable extent to hydrogen-abstraction reactions in acetylene-containing systems. These results are shown to be of significance in regard to the formation and subsequent reactions of polyalkynes in both the pyrolysis and flames of acetylene and other hydrocarbons.


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