Essential Protein Prediction Based on node2vec and XGBoost

Author(s):  
Nian Wang ◽  
Min Zeng ◽  
Yiming Li ◽  
Fang-xiang Wu ◽  
Min Li
2018 ◽  
Vol 17 (3) ◽  
pp. 243-250 ◽  
Author(s):  
Jiancheng Zhong ◽  
Yusui Sun ◽  
Wei Peng ◽  
Minzhu Xie ◽  
Jiahong Yang ◽  
...  

2021 ◽  
Author(s):  
Min Zeng ◽  
Nian Wang ◽  
Yifan Wu ◽  
Yiming Li ◽  
Fang-Xiang Wu ◽  
...  

2021 ◽  
Vol 22 (1) ◽  
Author(s):  
Fabio Antonaci ◽  
Sabrina Ravaglia ◽  
Gaetano S. Grieco ◽  
Stella Gagliardi ◽  
Cristina Cereda ◽  
...  

Abstract Background The mechanisms of genotype-phenotype interaction in Familiar Hemiplegic migraine type 2 (FHM2) are still far from clear. Different ATP1A2 mutations have been described, with a spectrum of phenotypes ranging from mild to severe. No genotype-phenotype correlations have been attempted. Case presentation We describe an Italian family with FHM and a missense ATP1A2 variant (L425H) not previously described. The clinical picture was mild in all the affected members. Conclusions Co-segregation of the variant with the aura phenotype was complete in this family, suggesting a 100% penetrance. In silico protein prediction softwares indicate that this variant may change the 3D structure of ATPA1A2 at the cytoplasmic loop between the two central transmembrane helices. Milder FHM phenotypes are rarely reported in literature, likely because case reports are biased towards the most severe phenotypes, with milder forms possibly misdiagnosed as sporadic migraine with aura forms (MAs), even with complex auras. Further studies taking into account intra-familiar variability and functional consequences on the channel protein may help clarify genotype-phenotype correlations.


Gene ◽  
2000 ◽  
Vol 243 (1-2) ◽  
pp. 37-45 ◽  
Author(s):  
Yoshiko Tone ◽  
Nobuyuki Tanahashi ◽  
Keiji Tanaka ◽  
Masahiro Fujimuro ◽  
Hideyoshi Yokosawa ◽  
...  

PLoS ONE ◽  
2017 ◽  
Vol 12 (1) ◽  
pp. e0168912 ◽  
Author(s):  
Jue Wang ◽  
Yejun Wang ◽  
Caiji Gao ◽  
Liwen Jiang ◽  
Dianjing Guo

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