Aberrant Methylation of Promoter Region of SPINT2/HAI-2 Gene: An Epigenetic Mechanism in Hepatitis C Virus-Induced Hepatocarcinogenesis

2015 ◽  
Vol 19 (7) ◽  
pp. 399-404 ◽  
Author(s):  
Ragaa A. Ramadan ◽  
Moyassar A. Zaki ◽  
Ahmed M. Awad ◽  
Lamiaa A. El-Ghalid
2019 ◽  
Vol 20 (15) ◽  
pp. 3753 ◽  
Author(s):  
Wirtz ◽  
Fischer ◽  
Backhaus ◽  
Bergmann ◽  
Brandt ◽  
...  

Two polymorphisms in the promoter region of macrophage migration inhibitory factor (MIF) - rs755622 and rs5844572 - exhibit prognostic relevance in inflammatory diseases. The aim of this study was to investigate a correlation between these MIF promoter polymorphisms and the severity of hepatitis C virus (HCV)-induced liver fibrosis. Our analysis included two independent patient cohorts with HCV-induced liver fibrosis (504 and 443 patients, respectively). The genotype of the single nucleotide polymorphism (SNP) -173 G/C and the repeat number of the microsatellite polymorphism -794 CATT5–8 were determined in DNA samples and correlated with fibrosis severity. In the first cohort, homozygous carriers of the C allele in the rs755622 had lower fibrosis stages compared to heterozygous carriers or wild types (1.25 vs. 2.0 vs. 2.0; p = 0.03). Additionally, ≥7 microsatellite repeats were associated with lower fibrosis stages (<F2) (p = 0.04). Comparable tendencies were observed in the second independent cohort, where fibrosis was assessed using transient elastography. However, once cirrhosis had been established, the C/C genotype and higher microsatellite repeats correlated with impaired liver function and a higher prevalence of hepatocellular carcinoma. Our study demonstrates that specific MIF polymorphisms are associated with disease severity and complications of HCV-induced fibrosis in a stage- and context-dependent manner.


2022 ◽  
Vol 11 ◽  
Author(s):  
Tarek Mohamed Kamal Motawi ◽  
Nermin Abdel Hamid Sadik ◽  
Dina Sabry ◽  
Sally Atef Fahim ◽  
Nancy Nabil Shahin

Hepatocellular carcinoma (HCC) is a universal health problem that is particularly alarming in Egypt. The major risk factor for HCC is hepatitis C virus (HCV) infection which is a main burden in Egypt. The epithelial cell adhesion molecule (EpCAM) is a stem cell marker involved in the tumorigenesis and progression of many malignancies, including HCC. We investigated the association of -935 C/G single nucleotide polymorphism in EpCAM promoter region (rs62139665) with HCC risk, EpCAM expression and overall survival in Egyptians. A total of 266 patients (128 HCV and 138 HCC cases) and 117 age- and sex-matched controls participated in this study. Genotyping, performed using allelic discrimination and confirmed by sequencing, revealed a significant association between EpCAM rs62139665 and HCC susceptibility, with higher GG genotype and G allele distribution in HCC patients than in non-HCC subjects. Such association was not detected in HCV patients compared to controls. EpCAM gene expression levels, determined in blood by RT-qPCR, and its serum protein expression levels, determined by ELISA, were significantly higher in GG relative to GC+CC genotype carriers in HCV and HCC patients in a recessive model. ROC analysis of EpCAM protein levels revealed significant discriminatory power between HCC patients and non-HCC subjects, with improved diagnostic accuracy when combining α-fetoprotein and EpCAM compared to that of α-fetoprotein alone. Altogether, EpCAM rs62139665 polymorphism is significantly associated with HCC and with EpCAM gene and protein expression levels in the Egyptian population. Moreover, serum EpCAM levels may hold promise for HCC diagnosis and for improving the diagnostic accuracy of α-fetoprotein.


2020 ◽  
Author(s):  
Gabriela Correia Matos de Oliveira ◽  
Aline Zamira Freire Teles Aragão ◽  
Luís Jesuíno de Oliveira Andrade

ABSTRACTIntroductionCytotoxic T lymphocyte-associated antigen 4 (CTLA-4) is a crucial immune control point receptor that regulates T cell activation. Epigenetic mechanisms, such as DNA methylation and histone modifications, modulate DNA packaging in the nucleus and influence Gene expression. Autoimmune thyroiditis may be associated with hepatitis C virus (HCV) infection as well as the CTLA-4 Gene.ObjectiveTo in silico simulate the methylation of the promoter region of CTLA-4 gene as an epigenetic factor triggering autoimmune thyroiditis by HCV.MethodsWe analyzed by in silico simulation the hypermethylation scenarios of the CTLA-4 Gene promoter region, aligning CTLA-4 and HCV sequences (genotypes 1, 2 and 3) through BLAST software - http://blast.ncbi.nlm.nih.gov/Blast.cgi, and identifying their methylated and unmethylated CpG sites. After the sequences obtained with the alignment of the methylation points by MultAlin program, the consensus sequences obtained were submitted to the BLAST similarity search. The GC content calculation and HCV annotation were performed using ENDMEMO (http://www.endmemo.com/bio/gc.php). The MethPrimer was used to identify and locate the methylation CpGi within the HCV genome.ResultsThe location of CTLA-4 on chromosome 2 and the alignment of the amino acid sequences are presented: CTLA-4 and HCV genotype 1, CTLA-4 and HCV genotype 2 and CTLA-4 and HCV genotype 3 are presented, as well as the methylation sites.ConclusionIn susceptible individuals, hypermethylation promotes reduced CTLA-4 expression and increases the risk of autoimmune thyroiditis in HCV-infected individuals.


1997 ◽  
Vol 96 (2) ◽  
pp. 427-428 ◽  
Author(s):  
FREDERICO SILVESTRI ◽  
GIOVANNI BARILLARI ◽  
RENATO FANIN ◽  
FLAVIA SALMASO ◽  
LAURA INFANTI ◽  
...  

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