Distinct co-occurrence patterns of prokaryotic community between the waters and sediments in lakes with different salinity

2020 ◽  
Vol 97 (1) ◽  
Author(s):  
Jian Yang ◽  
Hongchen Jiang ◽  
Xiaoxi Sun ◽  
Jianrong Huang ◽  
Mingxian Han ◽  
...  
Keyword(s):  
Community Composition ◽  
Saline Lakes ◽  
High Salinity ◽  
Temporal Variations ◽  
Prokaryotic Community ◽  
Low Salinity ◽  
Topological Features ◽  
Phylogenetic Composition ◽  
Occurrence Patterns ◽  
Lake Waters

ABSTRACT Temporal variations and co-occurrence patterns of the prokaryotic community in saline lakes remain elusive. In this study, we investigated the temporal variations of the prokaryotic community in six lakes with different salinity by using Illumina sequencing. The results showed that prokaryotic community compositions exhibited temporal variations in all studied lakes, which may be partially caused by temporal fluctuations of environmental variables (e.g. salinity, temperature, total nitrogen). Salinity fluctuations exhibited stronger influences on temporal variations of prokaryotic community composition in the lakes with low salinity than in those with high salinity. Stochastic factors (i.e. neutral processes) also contributed to temporal variations of prokaryotic community composition, and their contributions decreased with increasing salinity in the studied saline lakes. Network analysis showed that prokaryotic co-occurrence networks of the studied lakes exhibited non-random topology. Salinity affected the phylogenetic composition of nodes in the studied networks. The topological features (e.g. average connectivity and modularity) of the studied networks significantly differed between lake waters and sediments. Collectively, these results expand our knowledge of the mechanisms underlying prokaryotic community assembly and co-occurrence relationships in saline lakes with different salinity.

scholarly journals Biological interactions mediate context and species-specific sensitivities to salinity

2018 ◽  
Vol 374 (1764) ◽  
pp. 20180020 ◽  
Author(s):  
J. P. Bray ◽  
J. Reich ◽  
S. J. Nichols ◽  
G. Kon Kam King ◽  
R. Mac Nally ◽  
...  
Keyword(s):  
Community Composition ◽  
High Salinity ◽  
Toxicity Tests ◽  
Macroinvertebrate Communities ◽  
Biological Interactions ◽  
Ecological Processes ◽  
Low Salinity ◽  
Context Dependent ◽  
Direct Toxicity ◽  
Organism Interactions

Toxicants have both sub-lethal and lethal effects on aquatic biota, influencing organism fitness and community composition. However, toxicant effects within ecosystems may be altered by interactions with abiotic and biotic ecosystem components, including biological interactions. Collectively, this generates the potential for toxicant sensitivity to be highly context dependent, with significantly different outcomes in ecosystems than laboratory toxicity tests predict. We experimentally manipulated stream macroinvertebrate communities in 32 mesocosms to examine how communities from a low-salinity site were influenced by interactions with those from a high-salinity site along a gradient of salinity. Relative to those from the low-salinity site, organisms from the high-salinity site were expected to have greater tolerance and fitness at higher salinities. This created the potential for both salinity and tolerant-sensitive organism interactions to influence communities. We found that community composition was influenced by both direct toxicity and tolerant-sensitive organism interactions. Taxon and context-dependent responses included: (i) direct toxicity effects, irrespective of biotic interactions; (ii) effects that were owing to the addition of tolerant taxa, irrespective of salinity; (iii) toxicity dependent on sensitive-tolerant taxa interactions; and (iv) toxic effects that were increased by interactions. Our results reinforce that ecological processes require consideration when examining toxicant effects within ecosystems. This article is part of the theme issue ‘Salt in freshwaters: causes, ecological consequences and future prospects’.

Carbon-Isotope, Diatom, and Pollen Evidence for Late Holocene Salinity Change in a Brackish Marsh in the San Francisco Estuary

2001 ◽  
Vol 55 (1) ◽  
pp. 66-76 ◽  
Author(s):  
Roger Byrne ◽  
B. Lynn Ingram ◽  
Scott Starratt ◽  
Frances Malamud-Roam ◽  
Joshua N. Collins ◽  
...  
Keyword(s):  
San Francisco ◽  
High Salinity ◽  
Carbon Isotopic Composition ◽  
Brackish Marsh ◽  
San Francisco Estuary ◽  
Freshwater Inflow ◽  
Water Diversion ◽  
Freshwater Flow ◽  
Low Salinity ◽  
Carbon Isotopic

AbstractAnalysis of diatoms, pollen, and the carbon-isotopic composition of a sediment core from a brackish marsh in the northern part of the San Francisco Estuary has provided a paleosalinity record that covers the past 3000 yr. Changes in marsh composition and diatom frequencies are assumed to represent variations in freshwater inflow to the estuary. Three periods of relatively high salinity (low freshwater inflow) are indicated, 3000 to 2500 cal yr B.P., 1700 to 730 cal yr B.P., and ca. A.D. 1930 to the present. The most recent period of high salinity is primarily due to upstream storage and water diversion within the Sacramento–San Joaquin watershed, although drought may also have been a factor. The two earlier high-salinity periods are likely the result of reduced precipitation. Low salinity (high freshwater flow) is indicated for the period 750 cal yr B.P. to A.D. 1930.

scholarly journals Climate controls prokaryotic community composition in desert soils of the southwestern United States

2017 ◽  
Vol 93 (10) ◽  
Author(s):  
Theresa A. McHugh ◽  
Zacchaeus Compson ◽  
Natasja van Gestel ◽  
Michaela Hayer ◽  
Lisa Ballard ◽  
...  
Keyword(s):  
United States ◽  
Community Composition ◽  
Prokaryotic Community ◽  
Southwestern United States ◽  
Desert Soils ◽  
Climate Controls

Spatial and seasonal variability of emergent aquatic insects and nearshore spiders in a subtropical estuary

2019 ◽  
Vol 70 (4) ◽  
pp. 541 ◽  
Author(s):  
Martha J. Zapata ◽  
S. Mažeika P. Sullivan
Keyword(s):  
Aquatic Insects ◽  
High Salinity ◽  
Aquatic Insect ◽  
Freshwater Ecosystems ◽  
Dispersal Ability ◽  
Insect Community ◽  
Insect Communities ◽  
Low Salinity ◽  
Subtropical Estuary ◽  
Adult Aquatic Insects

Variability in the density and distribution of adult aquatic insects is an important factor mediating aquatic-to-terrestrial nutritional subsidies in freshwater ecosystems, yet less is understood about insect-facilitated subsidy dynamics in estuaries. We surveyed emergent (i.e. adult) aquatic insects and nearshore orb-weaving spiders of the families Tetragnathidae and Araneidae in a subtropical estuary of Florida (USA). Emergent insect community composition varied seasonally and spatially; densities were lower at high- than low-salinity sites. At high-salinity sites, emergent insects exhibited lower dispersal ability and a higher prevalence of univoltinism than low- and mid-salinity assemblages. Orb-weaving spider density most strongly tracked emergent insect density rates at low- and mid-salinity sites. Tetragnatha body condition was 96% higher at high-salinity sites than at low-salinity sites. Our findings contribute to our understanding of aquatic insect communities in estuarine ecosystems and indicate that aquatic insects may provide important nutritional subsidies to riparian consumers despite their depressed abundance and diversity compared with freshwater ecosystems.

Temporal patterns in the macrobenthic communities of the Hawkesbury estuary, New South Wales

1987 ◽  
Vol 38 (5) ◽  
pp. 607
Author(s):  
AR Jones
Keyword(s):  
Community Composition ◽  
Temporal Patterns ◽  
Single Species ◽  
Species Number ◽  
Community Patterns ◽  
Low Salinity ◽  
Number Of Species ◽  
South Wales ◽  
Physicochemical Factors ◽  
Number Of Individuals

Temporal patterns in number of species, number of individual animals and community composition of the soft-sediment zoobenthos of the Hawkesbury estuary are described and related to physicochemical factors. Replicate grabs were taken at 3-month intervals over 3 years (1977-1979) from sites located in three zones: the lower, middle and upper reaches. The number of species and number of individuals showed significant seasonal and annual differences in all zones. However, the pattern of these differences varied among sites and seasonal differences were not repeatable over years. Similarly, differences in community composition as revealed by classification were not seasonal. In the middle and lower reaches, these differences were apparently caused by the over- riding influence of non-seasonal climatic events, i.e. a major flood in 1978 and a drought throughout 1979. In the first two sampling following the flood, sample values for the numbers of both species and individuals were usually lowest and community composition was distinct from pre-flood and drought times. During the drought, the number of species was usually high and community composition relatively distinct. Whereas the number of species and community composition groupings were both significantly related to river discharge, the number of individuals was significantly correlated with temperature. All community variables were sometimes significantly related to salinity. The identity of numerically dominant species, as determined by Fager rankings, varied among times in both the lower and middle reaches. However, the polychaete Nephtys australiensis and the bivalve mollusc Notospisula trigonella were highest ranked overall in both zones. Community patterns in the low-salinity upper reaches differed from those further downstream by showing little change in numbers of species and community composition following the flood. Only the number of species was significantly correlated with any of the measured physicochemical variables, this being partly due to an influx of species during the drought. Furthermore, the upstream community was always dominated by the polychaete Ceratonereis limnetica and was thus the only community that could be characterised by a single species.

scholarly journals Rumen microbial community composition varies with diet and host, but a core microbiome is found across a wide geographical range

2015 ◽  
Vol 5 (1) ◽  
Author(s):  
Gemma Henderson ◽  
◽  
Faith Cox ◽  
Siva Ganesh ◽  
Arjan Jonker ◽  
...  
Keyword(s):  
Microbial Community ◽  
Community Composition ◽  
Microbial Community Composition ◽  
Methanogenic Archaea ◽  
Methane Formation ◽  
Core Microbiome ◽  
Rumen Microbes ◽  
Metabolic Interactions ◽  
Occurrence Patterns ◽  
Dominant Bacteria

Abstract Ruminant livestock are important sources of human food and global greenhouse gas emissions. Feed degradation and methane formation by ruminants rely on metabolic interactions between rumen microbes and affect ruminant productivity. Rumen and camelid foregut microbial community composition was determined in 742 samples from 32 animal species and 35 countries, to estimate if this was influenced by diet, host species, or geography. Similar bacteria and archaea dominated in nearly all samples, while protozoal communities were more variable. The dominant bacteria are poorly characterised, but the methanogenic archaea are better known and highly conserved across the world. This universality and limited diversity could make it possible to mitigate methane emissions by developing strategies that target the few dominant methanogens. Differences in microbial community compositions were predominantly attributable to diet, with the host being less influential. There were few strong co-occurrence patterns between microbes, suggesting that major metabolic interactions are non-selective rather than specific.

Root-associated community composition and co-occurrence patterns of fungi in wild grapevine

2021 ◽  
Vol 50 ◽  
pp. 101034
Author(s):  
Tomislav Radić ◽  
Matevž Likar ◽  
Katarina Hančević ◽  
Marjana Regvar ◽  
Mate Čarija ◽  
...  
Keyword(s):  
Community Composition ◽  
Wild Grapevine ◽  
Occurrence Patterns
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