scholarly journals Discovering foodborne illness in online restaurant reviews

2018 ◽  
Vol 25 (12) ◽  
pp. 1586-1592 ◽  
Author(s):  
Thomas Effland ◽  
Anna Lawson ◽  
Sharon Balter ◽  
Katelynn Devinney ◽  
Vasudha Reddy ◽  
...  

Abstract Objective We developed a system for the discovery of foodborne illness mentioned in online Yelp restaurant reviews using text classification. The system is used by the New York City Department of Health and Mental Hygiene (DOHMH) to monitor Yelp for foodborne illness complaints. Materials and Methods We built classifiers for 2 tasks: (1) determining if a review indicated a person experiencing foodborne illness and (2) determining if a review indicated multiple people experiencing foodborne illness. We first developed a prototype classifier in 2012 for both tasks using a small labeled dataset. Over years of system deployment, DOHMH epidemiologists labeled 13 526 reviews selected by this classifier. We used these biased data and a sample of complementary reviews in a principled bias-adjusted training scheme to develop significantly improved classifiers. Finally, we performed an error analysis of the best resulting classifiers. Results We found that logistic regression trained with bias-adjusted augmented data performed best for both classification tasks, with F1-scores of 87% and 66% for tasks 1 and 2, respectively. Discussion Our error analysis revealed that the inability of our models to account for long phrases caused the most errors. Our bias-adjusted training scheme illustrates how to improve a classification system iteratively by exploiting available biased labeled data. Conclusions Our system has been instrumental in the identification of 10 outbreaks and 8523 complaints of foodborne illness associated with New York City restaurants since July 2012. Our evaluation has identified strong classifiers for both tasks, whose deployment will allow DOHMH epidemiologists to more effectively monitor Yelp for foodborne illness investigations.

Author(s):  
Katelynn Devinney ◽  
Adile Bekbay ◽  
Thomas Effland ◽  
Luis Gravano ◽  
David Howell ◽  
...  

ObjectiveTo incorporate data from Twitter into the New York City Department of Health and Mental Hygiene foodborne illness surveillance system and evaluate its utility and impact on foodborne illness complaint and outbreak detection.IntroductionAn estimated one in six Americans experience illness from the consumption of contaminated food (foodborne illness) annually; most are neither diagnosed nor reported to health departments1. Eating food prepared outside of the home is an established risk factor for foodborne illness2. New York City (NYC) has approximately 24,000 restaurants and >8.5 million residents, of whom 78% report eating food prepared outside of the home at least once per week3. Residents and visitors can report incidents of restaurant-associated foodborne illness to a citywide non-emergency information service, 311. In 2012, the NYC Department of Health and Mental Hygiene (DOHMH) began collaborating with Columbia University to improve the detection of restaurant-associated foodborne illness complaints using a machine learning algorithm and a daily feed of Yelp reviews to identify reports of foodborne illness4. Annually, DOHMH manages over 4,000 restaurant-associated foodborne illness reports received via 311 and identified on Yelp which lead to the detection of about 30 outbreaks associated with a restaurant in NYC. Given the small number of foodborne illness outbreaks identified, it is probable that many restaurant-associated foodborne illness incidents remain unreported. DOHMH sought to incorporate and evaluate an additional data source, Twitter, to enhance foodborne illness complaint and outbreak detection efforts in NYC.MethodsDOHMH epidemiologists continue to collaborate with computer scientists at Columbia University who developed a text mining algorithm that identifies tweets indicating foodborne illness. Twitter data are received via a targeted application program interface query that searches for foodborne illness key words and uses metadata to select for tweets with a possible NYC location. Each tweet is assigned a sick score between 0–1; those meeting a threshold value of 0.5 are manually reviewed by an epidemiologist, and a survey link is tweeted to users who have tweeted about foodborne illness, requesting more information regarding the date and time of the foodborne illness event, restaurant details, and user contact information. Survey data are used to validate complaints and are incorporated in a daily analysis using all sources of complaint data to identify restaurants with multiple foodborne illness complaints within a 30-day period. This system was launched on November 29, 2016.ResultsDuring November 29, 2016–September 27, 2017, 12,015 tweets qualified for review (39/day on average); 2,288 (19.0%) indicated foodborne illness in NYC, and 1,778 (14.8%) were tweeted a survey link (510 foodborne illness tweets were either deleted by the Twitter user or were tweets from a user who was already sent a survey for the same foodborne illness incident). The survey tweets resulted in 92 likes, 12 retweets, 65 replies, 232 profile views and 348 survey link clicks. Of the 1,778 surveys sent, 27 were completed (response rate 1.5%), of which 20 (74.7%) confirmed foodborne illness associated with a NYC restaurant; none had been reported via 311/Yelp. Of those, 11 (55%) provided a phone number, of which 10 (90.9%) completed phone interviews. The completed surveys contributed to the identification of two restaurants with multiple foodborne illness complaints within a 30-day period.ConclusionsThe utility of Twitter for foodborne illness outbreak detection continues to be evaluated. While the survey response rate has been low, the identification of new complaints not otherwise reported to 311 and Yelp suggests this will be a useful tool. Future plans include using feedback data collected by DOHMH epidemiologist review to increase the sensitivity and specificity of the text mining algorithm and improve the location detection for Twitter users. In addition, we plan to implement enhancements to the survey and create a web page to promote survey responses. Furthermore, we intend to share this system with other health departments so that they might incorporate Twitter in their outbreak detection and public health surveillance activities.References1. Scallan E, Griffin PM, Angulo FJ, Tauxe RV, Hoekstra RM. Foodborne illness acquired in the United States--unspecified agents. Emerg Infect Dis. 2011 Jan;17(1):16-22.2. Jones TF, Angulo FJ. Eating in restaurants: a risk factor for foodborne disease? Clin Infect Dis. 2006 Nov 15;43(10):1324-8.3. New York City Health and Nutrition Examination Survey, 2013-2014 [Internet]. New York: New York City Department of Health and Mental Hygiene and The City University of New York; 2017 [cited 2017 Aug 28]. Available from: http://nychanes.org/data/4. Harrison C, Jorder M, Stern H, Stavinsky F, Reddy V, Hanson H, Waechter H, Lowe L, Gravano L, Balter S; Centers for Disease Control and Prevention (CDC).. Using online reviews by restaurant patrons to identify unreported cases of foodborne illness - New York City, 2012-2013. MMWR Morb Mortal Wkly Rep. 2014 May 23;63(20):441-5.


1935 ◽  
Vol 31 (1) ◽  
pp. 145-145
Author(s):  
C. Kereszturi ◽  
W. Н. Park ◽  
P. Vogel ◽  
М. Sevine

With financial assistance from the New York City Department of Health and an insurance company, and with the participation of a significant number of technicians, they carried out a study that is noteworthy for the careful observation.


Author(s):  
Kelsie Cowman ◽  
Yi Guo ◽  
Liise-anne Pirofski ◽  
David Wong ◽  
Hongkai Bao ◽  
...  

Abstract We partnered with the U.S. Department of Health and Human Services to treat high-risk, non-admitted COVID-19 patients with bamlanivimab in the Bronx, NY per Emergency Use Authorization criteria. Increasing post-treatment hospitalizations were observed monthly between December 2020-March 2021 in parallel to the emergence of SARS-CoV-2 variants in New York City.


2003 ◽  
Vol 118 (2) ◽  
pp. 144-153 ◽  
Author(s):  
Pablo San Gabriel ◽  
Lisa Saiman ◽  
Katherine Kaye ◽  
Muriel Silin ◽  
Ida Onorato ◽  
...  

Objectives. Accurate surveillance of tuberculosis (TB) in children is critical because such cases represent recent transmission, but surveillance is difficult as only 10% to 50% of cases are culture-confirmed. Hospital-based sources were used to develop alternative surveillance to assess completeness of reporting for pediatric TB in northern Manhattan and Harlem from 1993 through 1995. Methods. Alternative surveillance sources included ICD-9-CM hospital discharge codes for active TB and gastric aspirate reports. Cases identified by alternative surveillance were compared with cases previously reported to the New York City Department of Health (NYC DOH). Results. Alternative surveillance detected 25 cases of possible pediatric TB, of which four (16%) had never been reported to the NYC DOH and three (12%) had been reported as suspect cases, but had not fulfilled the criteria for a reportable case of pediatric TB. Of these seven newly counted cases, three were detected by ICD-9-CM codes, three by a gastric aspirate log book, and one by both. In contrast, 13 other cases had been reported to the NYC DOH, but were undetected by our alternative surveillance; eight of these could be verified with available medical records. Thus, the demographic and clinical characteristics of the 25 detected and the eight undetected cases with available medical records were evaluated in this study. Conclusions. Alternative surveillance proved effective, was complementary to the NYC DOH surveillance efforts, and increased the number of pediatric TB cases identified during the study period by 21%.


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