scholarly journals Identification of Resistance to Multiple Fungicides in Field Populations of Venturia inaequalis

Plant Disease ◽  
2011 ◽  
Vol 95 (8) ◽  
pp. 921-926 ◽  
Author(s):  
Kimberly S. Chapman ◽  
George W. Sundin ◽  
Janna L. Beckerman

Venturia inaequalis, the causal agent of apple scab, is controlled primarily by fungicides. Long-term, extensive fungicide use has led to the development of resistance to multiple fungicides. To assess fungicide resistance, isolates of V. inaequalis were collected from Indiana and Michigan orchards. Single-spore derived isolates were evaluated by mycelium growth assays with previously determined discriminatory doses on media containing dodine, kresoxim-methyl, myclobutanil, or thiophanate-methyl. Of 195 isolates tested, 5.2, 0.7, 57.0, and 92.6% of isolates were found to be resistant to dodine, kresoxim-methyl, myclobutanil, and thiophanate-methyl, respectively. This is the first report of kresoxim-methyl field resistance in these states. Isolates resistant or shifted to a single fungicide were often found to have multiple fungicide resistance. Of all isolates tested, 38% were identified as resistant or shifted to two fungicides, and 12% were resistant or shifted to all four fungicides tested. No fitness penalty was found for isolates resistant to multiple fungicides based on a statistical analysis of mycelial growth and conidial production.

2020 ◽  
Vol 86 (17) ◽  
Author(s):  
Katrin M. Ayer ◽  
Mei-Wah Choi ◽  
Stephanie T. Smart ◽  
April E. Moffett ◽  
Kerik D. Cox

ABSTRACT Understanding how fungicide application practices affect selection for fungicide resistance is imperative for continued sustainable agriculture. Here, we examined the effect of field applications of the succinate dehydrogenase inhibitor (SDHI) fluxapyroxad at different doses and mixtures on the SDHI sensitivity of Venturia inaequalis, the apple scab pathogen. Fungicide applications were part of selection programs involving different doses (high or low) and mixtures (with a second single-site fungicide or a multisite fungicide). These programs were tested in two apple orchards over 4 years to determine potential cumulative selection effects on resistance. Each year after program applications, apple scab lesions were collected, and relative growth assays were conducted to understand shifts in fluxapyroxad sensitivity. After 4 years, there was a trend toward a reduction in sensitivity to fluxapyroxad for most selection programs in comparison to that in the non-selective-pressure control. In most years, the selection program plots treated with low-dose fluxapyroxad applications resulted in a larger number of isolates with reduced sensitivity, supporting the use of higher doses for disease management. Few significant differences (P < 0.05) in fungicide sensitivity were observed between isolates collected from plots where fungicide mixtures were applied compared to that in untreated plots, supporting the use of multiple modes of action in field applications. In all, appropriate doses and mixtures may contribute to increased longevity of SDHI fungicides used on perennial crops like apples. IMPORTANCE Of much debate is the effect of fungicide application dose on resistance development, as fungicide resistance is a critical barrier to effective disease management in agricultural systems. Our field study in apples investigated the effect of fungicide application dose and mixture on the selection of succinate dehydrogenase inhibitor resistance in Venturia inaequalis, a fungal pathogen that causes the economically important disease apple scab. Understanding how to best delay the development of resistance can result in increased efficacy, fewer applications, and sustainable fungicide use. Results from this study may have relevance to other perennial crops that require multiple fungicide applications and that are impacted by the development of resistance.


2001 ◽  
Vol 91 (8) ◽  
pp. 776-781 ◽  
Author(s):  
Wolfram Köller ◽  
W. F. Wilcox

In the United States, populations of the apple scab pathogen Venturia inaequalis have progressed through three consecutive rounds of fungicide resistance development, first to dodine, then to the benzimidazoles, and most recently to the sterol demethylation inhibitors (DMIs). Analysis of extensive monitoring data have to date provided no indication of detectable cross-resistance or partial cross-resistance of V. inaequalis populations to the three unrelated classes of fungicides prior to the selection of resistant subpopulations. However, in this study, resistance to both benomyl and DMIs developed to significantly higher frequencies within the previously established dodine-resistant population than in the population sensitive to dodine. Accelerated selection of phenotypes double resistant to dodine and the DMI fenarimol was apparent over the course of distinct seasons of apple scab management with either dodine or fenarimol. The data provide evidence for an accelerated speed of resistance development among phenotypes of V. inaequalis already resistant to an unrelated fungicide. This finding represents a departure from the previous model, which assumed entirely independent rounds of resistance developments. The data indicate that phenotypes of V. inaequalis might not only be selected for the trait of fungicide resistance but also for traits allowing a more flexible response to changes in the environment where they compete.


Plant Disease ◽  
2015 ◽  
Vol 99 (6) ◽  
pp. 806-814 ◽  
Author(s):  
Meng-Jun Hu ◽  
Anja Grabke ◽  
Madeline E. Dowling ◽  
Helen J. Holstein ◽  
Guido Schnabel

Anthracnose fruit rot was observed in some late-season peach cultivars in South Carolina in the 2012 and 2013 production seasons as well as increased anthracnose leaf spot of blueberry in a commercial operation of the same state in 2012. Single-spore isolates of Colletotrichum siamense were either sensitive or resistant to both thiophanate-methyl and azoxystrobin with the concentration of the fungicide at which fungal development is inhibited by 50% of ≥100 μg/ml. Resistant isolates revealed the E198A mutation in β-tubulin and the G143A mutation in cytochrome b. Nucleotide sequence analysis of the complete CYTB gene from genomic DNA of C. siamense isolates revealed an intronless genotype (CsI) and a genotype revealing two introns (CsII) at amino acid positions 131 and 164. Resistance to thiophanate-methyl or azoxystrobin was not found in isolates of C. fructicola collected from peach fruit. The CYTB gene of isolates of this species was of the CfII genotype or revealed a unique CfIIa genotype. Phylogenetic analysis of C. siamense isolates from different locations and different crops showed that the resistant isolates were genetically closer to each other than to sensitive isolates, suggesting that field resistance to thiophanate-methyl and azoxystrobin fungicides is derived from a common ancestor.


2007 ◽  
Vol 8 (1) ◽  
pp. 3 ◽  
Author(s):  
Sasha C. Marine ◽  
David G. Schmale ◽  
Keith S. Yoder

Sterol-inhibiting (SI) fungicides are widely used to manage apple scab, caused by Venturia inaequalis. However, recent observations indicate that populations of V. inaequalis in orchards in Virginia have developed resistance to myclobutanil and other SI fungicides. Little is known about the frequency and distribution of fungicide resistance in apple scab populations in Virginia. Isolates of V. inaequalis were collected from three different apple orchards in Winchester, VA in 2006. Orchards were treated with myclobutanil on 12 April, 19 April, 1 May, 30 May, and 7 July. The sensitivity of 87 single-spored isolates of V. inaequalis to myclobutanil was determined by monitoring their growth on agar dishes amended with 0, 0.1, 0.5, or 1.0 μg/ml myclobutanil. A relative continuum of fungicide resistance was observed: 16 isolates were resistant, 40 isolates were moderately resistant, and 31 isolates were sensitive to myclobutanil. After 28 days, the mean growth of isolates collected from trees treated with myclobutanil was significantly greater than that of isolates collected from non-treated trees at all concentrations of myclobutanil tested in vitro. High levels of fungicide resistance found in populations of V. inaequalis suggest that replacement programs may need to be developed to manage apple scab in Virginia. Accepted for publication 4 September 2007. Published 13 November 2007.


Author(s):  
N. G. Krasova ◽  
А. V. Pikunova ◽  
А. M. Galasheva

Apple (Malus. Mill.) germplasm has been studied for resistance to scab (Venturia inaequalis (Ske.) in the Central Russia at VNIISPK (Russian Research institute for Fruit Crop Breeding) for many years. Apple varieties with high field resistance to scab have been identified. Variety screening for DNA markers linked to genes of resistance made it possible to find among the new varieties of VNIISPK breeding digenic ones (Vf and Vm – Poezia, Va1 and Vf –Svezhest, Vm and Va1 – Zarianka, Patriot and Sokovinka) as well as sources of Vh2 (Reka) and Va1 (Antonovka Krasnobochka, Antonovka Obyknovennaya, Patriot, Orlik, Zarianka, Bessemianka Michurinskaya, Svezhest and Sokovinka). The genotyping confirmed the Vm presence in Zarianka, Orlovim, Patriot, Sokovinka and Chistotel and the Vf presence in Afrodita, Veniaminovskoye, Zhilinskoye, Zdorovie, Imrus, Rozhdestvenskoye, Svezhest, Solnyshko, Stroevskoye and Yubilar. Apple varieties that combine polygenic and monogenic resistance to scab – Imrus, Zdorovie and Svezhest are of great interest for practical use. The involvement of new sources of resistance will allow developing varieties with long-term resistance to scab.


2004 ◽  
Vol 5 (1) ◽  
pp. 3 ◽  
Author(s):  
William W. Turechek ◽  
Wolfram Köller

Over the past thirty years, fungicide resistance has been cited as the cause of large-scale crop losses due to apple scab in a number of commercial orchards in the Northeast. The strobilurins represent the most recent class of fungicides for which the threat of resistance exists. In this article we examine the use of strobilurin fungicides at their highest and lowest labeled rates and as a mixture of the lowest labeled rate with a protectant fungicide in commercial spray programs for efficacy against apple scab as well as their utility in a resistance management program. Our results suggest that anti-resistance properties of high strobilurin rates are superior to low rates and low rate mixtures with a protectant fungicide. Accepted for publication 26 August 2004. Published 8 September 2004.


Plant Disease ◽  
2021 ◽  
Author(s):  
Yang Zhou ◽  
Haidong Bu ◽  
Chingchai Chaisiri ◽  
Qin Tan ◽  
Li Wang ◽  
...  

Apple cv. ‘Huangtaiping’ (Malus pumila Mill.) is grown widely in northern China for the production of jellies, preserves, and cider. In 2018, atypical scab symptoms were observed on fruits of Huangtaiping in Heilongjiang Province of China. The disease incidence was estimated at approximately 0.4%. Symptoms were scab-like black spots (3 to 5 mm diam.) distinct from scab caused by Venturia inaequalis. Conidia were generally produced on lesions and using a modified microscope (Goh 1999), a single spore was picked up from each sample on water agar plate with a glass needle and then transferred to PDA amended with lactic acid (0.50 ml/L) and sulfate streptomycin (0.20 g/L). Fifteen isolates were obtained and incubated at 21°C for 6 weeks in darkness on PDA. The colonies on PDA were gray-black with circular morphology and floccose texture, which were similar with the characteristics of V. asperata described previously (Turan et al. 2019). The conidia were cylindrical to fusiform, 0 to 1 septate, yellowish and 19.7 (13.5 to 25.8) × 5.7 (3.6 to 6.9) μm (n = 10) in size, which were larger than previously described ones (Turan et al. 2019). DNA of three randomly selected isolates were extracted by a modified SDS method (Ping et al. 2004). The internal transcribed spacer (ITS) region of rDNA of the three selected isolates was amplified with the primers ITS4/ITS5 (White et al. 1990), sequenced and deposited in GenBank (MN958665, MN95866 and MN958667). BLAST analysis showed that the amplified sequences were identical and had 99.3% sequence identity with V. asperata (AF333447, MT459450 and MT459451), 95.4% sequence identity with V. cerasi (MK810963 and MK810964) and 94.3% sequence identity with V. carpophila (MN958609, MN958610 and MN958611). In addition, the complete large subunit ribosomal RNA gene (LSU) was amplified with the primers LROR/LR5 (Vilgalys and Hester 1990), sequenced and deposited in GenBank (MT845787, MT845788 and MT845789). BLAST analysis showed that the amplified sequences were identical and had 99.7% sequence identity with V. asperata (EF114711), 99.2% identity with V. carpophila (MT772296, MT845732 and MT845733 ) and 98% identity with V. cerasi (MK810848 and MK810849). Phylogenetic analysis based on concatenated ITS and LSU sequences showed that the tested isolates grouped with V. asperata strain 2349 in the same clade and the closest species with V. asperata was V. carpophila, followed by V. cerasi. In July 2019, pathogenicity of the isolate VAHLJ3-1-1 was evaluated on Huangtaiping. A conidia suspension with a concentration of 5×105/ml was sprayed evenly on the surface of six fruits. In order to maintain high humidity, inoculated fruits were wrapped with a plastic bag (a cotton ball with water was placed in the plastic bag) to maintain wetness for 3 days. Six fruits sprayed with water were used as a control. Four weeks after inoculation, similar symptom of atypical scab was observed on fruits of Huangtaiping, and V. asperata was isolated again from six inoculated fruits with reisolation frequency of 100% by the single spore isolation, while no symptom was observed on the control fruits. Based on the morphological and molecular identifications, the causal agent of atypical scab on Huangtaiping was identified as V. asperata. Apple scab is usually caused by V. inaequalis (Shen et al. 2020). However, apple scab has also been caused by V. asperata in Italy and France (Caffier et al. 2012; Turan et al. 2019). To the best of our knowledge, this is the first report of V. asperata associated with apple scab-like lesions in China. This information augments our knowledge of the spectrum of Venturia species associated with disease on apple fruit and will be a valuable foundation underpinning management strategies for this cultivar.


Plant Disease ◽  
2018 ◽  
Vol 102 (9) ◽  
pp. 1803-1810 ◽  
Author(s):  
Juliana S. Baggio ◽  
Natalia A. Peres ◽  
Lilian Amorim

Botrytis fruit rot, caused by Botrytis cinerea, is one of the most important strawberry diseases worldwide, and fungicide applications are often used to manage the disease in commercial production. Isolates of B. cinerea were collected from conventional and organic strawberry fields in four Brazilian States from 2013 to 2015 and their sensitivity to the main single-site mode-of action fungicides used in Brazil was tested. Resistance to azoxystrobin, iprodione, pyrimethanil, and thiophanate-methyl was found and values for effective concentration that inhibited mycelial growth by 50% were higher than 71.9, 1.2, 5.0, and 688 µg/ml, respectively, regardless the production system. Resistance to these fungicides was observed in 87.5, 76.6, 23.4, and 92.2% of isolates from conventional fields and 31.4, 22.9, 14.3, and 51.4% of isolates from organic fields, respectively. Moreover, frequencies of isolates with multiple fungicide resistance to the four active ingredients were 20.6 and 2.8% whereas 6.3 and 27.8% were sensitive to the four fungicides for conventional and organic areas, respectively. Molecular analyses of the cytochrome b, β-tubulin, and bos1 genes revealed the presence of G143A; E198A; and I365 N/S, Q369P, or N373S mutations, respectively, in resistant isolates of B. cinerea. Field rates of fungicides sprayed preventively to inoculated strawberry fruit failed to control disease caused by the respective resistant isolates.


Plant Disease ◽  
2017 ◽  
Vol 101 (2) ◽  
pp. 366-371 ◽  
Author(s):  
Aparna Petkar ◽  
David B. Langston ◽  
James W. Buck ◽  
Katherine L. Stevenson ◽  
Pingsheng Ji

Fusarium wilt, incited by the fungus Fusarium oxysporum f. sp. niveum, is a soilborne disease that affects watermelon production worldwide. Approaches for effective management of Fusarium wilt in watermelon are limited. Studies conducted in recent years indicated that prothioconazole and thiophanate-methyl reduced the disease significantly under field conditions. However, effects of the fungicides on different life stages of F. oxysporum f. sp. niveum and potential existence of fungicide resistance in F. oxysporum f. sp. niveum populations are unknown. In the present study, effects of prothioconazole and thiophanate-methyl on mycelium growth and spore germination of F. oxysporum f. sp. niveum isolates collected in watermelon fields in Georgia were determined. In vitro mycelium growth studies indicated that all 100 isolates evaluated were sensitive to prothioconazole; the effective concentration that suppressed mycelium growth by 50% ranged from 0.75 to 5.69 μg/ml (averaged 1.62 μg/ml). In contrast, 33 and 4% of the isolates were resistant to thiophanate-methyl at 10 and 100 μg/ml, respectively. Microconidial germination assays showed that 36 and 64% of the isolates tested were sensitive or intermediately sensitive to prothioconazole at 100 μg/ml but the fungicide did not inhibit spore germination at 10 μg/ml. Sequencing a portion of the β-tubulin gene of eight isolates resistant or sensitive to thiophanate-methyl indicated that fungicide resistance was associated with a point mutation at nucleotide position 200, resulting in a substitution of phenylalanine by tyrosine. This is the first report of isolates of F. oxysporum resistant to thiophanate-methyl. Results of the research suggest that prothioconazole may be a viable option for management of Fusarium wilt of watermelon whereas thiophanate-methyl should be used judiciously due to the existence of isolates resistant to the fungicide.


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