scholarly journals Complete Genome Sequence Resource of a Strain of Curtobacterium flaccumfaciens pv. flaccumfaciens, the Causal Agent of Bacterial Wilt of Common Bean, from Turkey

2020 ◽  
Vol 110 (12) ◽  
pp. 2010-2013
Author(s):  
Michael L. O’Leary ◽  
Robert L. Gilbertson
Keyword(s):  
Common Bean ◽  
Genome Sequence ◽  
Bacterial Wilt ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Bacterial Pathogen ◽  
Causal Agent ◽  
Long Read ◽  
Commercial Field ◽  
Bean Leaves

Curtobacterium flaccumfaciens pv. flaccumfaciens is the causal agent of bacterial wilt of common bean (Phaseolus vulgaris), a disease that can reduce yields of this economically important crop worldwide. Current genomics resources for this bacterial pathogen are limited. Therefore, long-read sequencing was used to determine the complete genome sequence of a pathogenic C. flaccumfaciens pv. flaccumfaciens strain isolated from common bean leaves showing irregular necrotic lesions with yellow borders collected in a commercial field in Turkey in 2015.

scholarly journals Complete Genome Sequence of Pseudomonas amygdali pv. tabaci Strain 6605, a Causal Agent of Tobacco Wildfire Disease

2021 ◽  
Vol 10 (28) ◽  
Author(s):  
Hidenori Matsui ◽  
Takafumi Nishimura ◽  
Shuta Asai ◽  
Sachiko Masuda ◽  
Ken Shirasu ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Bacterial Pathogen ◽  
Causal Agent ◽  
Circular Chromosome ◽  
Content Type ◽  
Pseudomonas Amygdali

Pseudomonas amygdali pv. tabaci strain 6605 is the bacterial pathogen causing tobacco wildfire disease that has been used as a model for elucidating virulence mechanisms. Here, we present the complete genome sequence of P. amygdali pv. tabaci 6605 as a circular chromosome from reads using a PacBio sequencer.

scholarly journals Complete Genome Sequence of Multidrug-Resistant Strain Nocardia wallacei FMUON74, Isolated from a Sputum Culture

2020 ◽  
Vol 9 (47) ◽  
Author(s):  
Masahiro Toyokawa ◽  
Makoto Taniguchi ◽  
Kazuma Uesaka ◽  
Keiko Nishimura
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Resistant Strain ◽  
Complete Genome ◽  
Hybrid Approach ◽  
Multidrug Resistant ◽  
Content Type ◽  
Short Read Sequencing ◽  
Long Read ◽  
Multidrug Resistant Strain

ABSTRACT Nocardia wallacei is one of the members of the N. transvalensis complex which possess a highly unique susceptibility pattern. Here, we describe the closed complete genome sequence of the multidrug-resistant strain N. wallacei FMUON74, which was obtained using a hybrid approach combining Nanopore long-read sequencing and Illumina and DNBseq short-read sequencing.

scholarly journals Chromosome-Scale Assembly of the Complete Genome Sequence of Porcisia hertigi, Isolate C119, Strain LV43

2021 ◽  
Vol 10 (41) ◽  
Author(s):  
Hatim Almutairi ◽  
Michael D. Urbaniak ◽  
Michelle D. Bates ◽  
Waleed S. Al-Salem ◽  
Rod J. Dillon ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Content Type ◽  
Long Read ◽  
Central Panama

Porcisia hertigi is a parasitic kinetoplastid first isolated from porcupines ( Coendou rothschildi ) in central Panama in 1965. We present the complete genome sequence of P. hertigi , isolate C119, strain LV43, sequenced using combined short- and long-read technologies. This complete genome sequence will contribute to our knowledge of the parasitic genus Porcisia .

scholarly journals Draft Genome Sequence of “Candidatus Spirobacillus cienkowskii,” a Pathogen of Freshwater Daphnia Species, Reconstructed from Hemolymph Metagenomic Reads

2018 ◽  
Vol 7 (22) ◽  
Author(s):  
Luana Bresciani ◽  
Leandro N. Lemos ◽  
Nina Wale ◽  
Jonathan Y. Lin ◽  
Alexander T. Strauss ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Draft Genome ◽  
Gc Content ◽  
Bacterial Pathogen ◽  
Bacterial Motility ◽  
Draft Genome Sequence ◽  
Daphnia Species ◽  
Red Color

We report here the near-complete genome sequence of “Candidatus Spirobacillus cienkowskii,” a spiral-shaped, red-pigmented uncultivated bacterial pathogen of Daphnia spp. The genome is 2.74 Mbp in size, has a GC content of 32.1%, and contains genes associated with bacterial motility and the production of carotenoids, which could explain the distinctive red color of hosts infected with this pathogen.

scholarly journals Complete Genome Sequence of Rubrobacter xylanophilus Strain AA3-22, Isolated from Arima Onsen in Japan

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Natsuki Tomariguchi ◽  
Kentaro Miyazaki
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Hot Spring ◽  
Sequencing Data ◽  
Short Read ◽  
Content Type ◽  
Short Read Sequencing ◽  
Oxford Nanopore ◽  
Long Read

Rubrobacter xylanophilus strain AA3-22, belonging to the phylum Actinobacteria, was isolated from nonvolcanic Arima Onsen (hot spring) in Japan. Here, we report the complete genome sequence of this organism, which was obtained by combining Oxford Nanopore long-read and Illumina short-read sequencing data.

scholarly journals Complete Genome Sequence of the Fish PathogenFlavobacterium columnareStrain C#2

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Ryan P. Bartelme ◽  
Ryan J. Newton ◽  
Yongtao Zhu ◽  
Nan Li ◽  
Benjamin R. LaFrentz ◽  
...  
Keyword(s):  
Freshwater Fish ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Bacterial Pathogen ◽  
Flavobacterium Columnare ◽  
Circular Chromosome ◽  
Gram Negative ◽  
Water Fish ◽  
Columnaris Disease

Flavobacterium columnareis a Gram-negative bacterial pathogen that causes columnaris disease of freshwater fish.Flavobacterium columnarestrain C#2 was isolated from a diseased warm-water fish and is typed as genomovar II. The genome consists of a single 3.33-Mb circular chromosome with 2,689 predicted coding genes.

scholarly journals Complete Genome Sequence of Burkholderia glumae BGR1

2009 ◽  
Vol 191 (11) ◽  
pp. 3758-3759 ◽  
Author(s):  
JaeYun Lim ◽  
Tae-Ho Lee ◽  
Baek Hie Nahm ◽  
Yang Do Choi ◽  
Minkyun Kim ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Causative Agent ◽  
Bacterial Wilt ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Burkholderia Glumae ◽  
Field Crops ◽  
Seedling Rot

ABSTRACT Burkholderia glumae is the causative agent of grain and seedling rot in rice and of bacterial wilt in many field crops. Here, we report the complete genome sequence of B. glumae BGR1 isolated from a diseased rice panicle in Korea.

scholarly journals Complete genome sequence of bean leaf crumple virus, a novel begomovirus infecting common bean in Colombia

2017 ◽  
Vol 162 (6) ◽  
pp. 1773-1776 ◽  
Author(s):  
Monica Carvajal-Yepes ◽  
Leidy Zambrano ◽  
Juan M. Bueno ◽  
Bodo Raatz ◽  
Wilmer J. Cuellar
Keyword(s):  
Common Bean ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome

scholarly journals Complete Genome Sequence of Ichthyobacterium seriolicida JBKA-6T, Isolated from Yellowtail (Seriola quinqueradiata) Affected by Bacterial Hemolytic Jaundice

2017 ◽  
Vol 5 (6) ◽  
Author(s):  
Tomokazu Takano ◽  
Yoji Nakamura ◽  
Tomomasa Matsuyama ◽  
Takamitsu Sakai ◽  
Yuya Shigenobu ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Bacterial Pathogen ◽  
Content Type ◽  
Seriola Quinqueradiata

ABSTRACT Ichthyobacterium seriolicida is a fish bacterial pathogen that causes hemolytic jaundice in farmed yellowtail in Japan. To understand more about the characteristics of this bacterium, we determined its complete genome sequence. Two hemolysin genes which may be important for its pathogenicity were identified in the I. seriolicida genome.

scholarly journals Complete Genome Sequence of Mycoplasma bovis Strain 08M

2017 ◽  
Vol 5 (19) ◽  
Author(s):  
Shengli Chen ◽  
Huafang Hao ◽  
Ping Zhao ◽  
Pengcheng Gao ◽  
Ying He ◽  
...  
Keyword(s):  
Respiratory Disease ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Bacterial Pathogen ◽  
Mycoplasma Bovis ◽  
Content Type

ABSTRACT Mycoplasma bovis is a major bacterial pathogen that can cause respiratory disease, mastitis, and arthritis in cattle. We report here the complete and annotated genome sequence of M. bovis strain 08M, isolated from a calf lung with pneumonia in China.

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