Structure and assembly of the capsid of bacteriophage P22

Identification of the genes and proteins involved in phage P22 formation has permitted a detailed analysis of particle assembly, revealing some unexpected aspects. The polymerization of the major coat protein (gene 5 product) into an organized capsid is directed by a scaffolding protein (gene 8 product) which is absent from mature phage. The resulting capsid structure (prohead) is the precursor for DNA encapsidation. All of the scaffolding protein exits from the prohead in association with DNA packaging. These molecules then recycle, directing further rounds of prohead assembly. The structure of the prohead has been studied by electron microscopy of thin sections of phage infected cells, and by low angle X-ray scattering of concentrated particles. The results show that the prohead is a double shell structure, or a ball within a shell. The inner ball or shell is composed of the scaffolding protein while the outer shell is composed of coat protein. The conversion from prohead to mature capsid is associated with an expansion of the coat protein shell. It is possible that the scaffolding protein molecules exit through the capsid lattice. When DNA encapsidation within infected cells is blocked by mutation, scaffolding protein is trapped in proheads and cannot recycle. Under these conditions, the rate of synthesis of gp8 increases, so that normal proheads continue to form. These results suggest that free scaffolding protein negatively regulates its own further synthesis, providing a coupling between protein synthesis and protein assembly.

2019 ◽  
Author(s):  
Kunica Asija ◽  
Carolyn M. Teschke

AbstractdsDNA tailed phages and herpesviruses assemble their capsids using coat proteins that have the ubiquitous HK97 fold. Though this fold is common, we do not have a thorough understanding of the different ways viruses adapt it to maintain stability in various environments. The HK97-fold E-loop, which connects adjacent subunits at the outer periphery of capsomers, has been implicated in capsid stability. Here we show that in bacteriophage P22, residue W61 at the tip of the E-loop plays a role in stabilizing procapsids and in maturation. We hypothesize that a hydrophobic pocket is formed by residues I366 and W410 in the P-domain of a neighboring subunit within a capsomer, into which W61 fits like a peg. In addition, W61 likely bridges to residues A91 and L401 in P-domain loops of an adjacent capsomer, thereby linking the entire capsid together with a network of hydrophobic interactions. There is conservation of this hydrophobic network in the distantly related P22-like phages, indicating that this structural feature is likely important for stabilizing this family of phages. Thus, our data shed light on one of the varied elegant mechanisms used in nature to consistently build stable viral genome containers through subtle adaptation of the HK97 fold.IMPORTANCESimilarities in assembly reactions and coat protein structures of the dsDNA tailed phages and herpesviruses make phages ideal models to understand capsid assembly and identify potential targets for antiviral drug discovery. The coat protein E-loops of these viruses are involved in both intra-and intercapsomer interactions. In phage P22, hydrophobic interactions peg the coat protein subunits together within a capsomer, where the E-loop hydrophobic residue W61 of one subunit packs into a pocket of hydrophobic residues I366 and W410 of the adjacent subunit. W61 also makes hydrophobic interactions with A91 and L401 of a subunit in an adjacent capsomer. We show these intra-and intercapsomer hydrophobic interactions form a network crucial to capsid stability and proper assembly.


1974 ◽  
Vol 20 (5) ◽  
pp. 731-734
Author(s):  
Claude J. Henry

Numerous core particles measuring 45–50 nm in diameter were observed in the nuclei of cells infected with herpes simplex virus for 20 h. The sites for core-particle assembly appeared to be closely associated with viral DNA-replicating areas in the nucleus. The core particles were subsequently observed to be associated with the protein subunits that comprise the outer capsid of the virus. Outer capsids were formed only in areas in which core particles were present; however, numerous empty capsids (lacking a core particle) measuring 80–90 nm in diameter were also observed. The effect of trypsin digestion on thin sections of infected cells revealed that the core particles were selectively degraded by trypsin, but that the outer capsid and envelope remained relatively intact. The core particles appeared to be more sensitive to trypsin treatment after acquisition of a capsid and envelope.


1998 ◽  
Vol 281 (1) ◽  
pp. 81-94 ◽  
Author(s):  
Roman Tuma ◽  
Matthew H Parker ◽  
Peter Weigele ◽  
Laura Sampson ◽  
Yahong Sun ◽  
...  

Virology ◽  
2011 ◽  
Vol 421 (1) ◽  
pp. 1-11 ◽  
Author(s):  
Juliana R. Cortines ◽  
Peter R. Weigele ◽  
Eddie B. Gilcrease ◽  
Sherwood R. Casjens ◽  
Carolyn M. Teschke

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