scholarly journals Description and complete genome sequence of Bradyrhizobium amphicarpaeae sp. nov., harbouring photosystem and nitrogen-fixation genes

2019 ◽  
Vol 69 (9) ◽  
pp. 2841-2848 ◽  
Author(s):  
Eden S. P. Bromfield ◽  
Sylvie Cloutier ◽  
Hai D. T. Nguyen
Keyword(s):  
Nitrogen Fixation ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Nitrogen Fixation Genes

scholarly journals Complete Genome Sequence of Rhizobium japonicum Podophage Pasto

2021 ◽  
Vol 10 (3) ◽  
Author(s):  
Nikhil Manuel ◽  
Leika Rushing ◽  
Aravind Ravindran ◽  
Heather Newkirk ◽  
Ben Burrowes ◽  
...  
Keyword(s):  
Nitrogen Fixation ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Analysis ◽  
Rhizobium Japonicum ◽  
Negative Bacterium ◽  
Significant Similarity ◽  
Gram Negative ◽  
Content Type

ABSTRACT Rhizobium japonicum is a Gram-negative bacterium of interest for research into nitrogen fixation in legumes. This article describes the isolation, sequencing, and annotation of R. japonicum podophage Pasto. While it shows no significant similarity to identified phages, genomic analysis indicates that Pasto may be temperate and is a novel T7-like podophage.

scholarly journals Complete Genome Sequence of Sulfuriferula sp. Strain AH1, a Sulfur-Oxidizing Autotroph Isolated from Weathered Mine Tailings from the Duluth Complex in Minnesota

2017 ◽  
Vol 5 (32) ◽  
Author(s):  
Daniel S. Jones ◽  
Elizabeth W. Roepke ◽  
An An Hua ◽  
Beverly E. Flood ◽  
Jake V. Bailey
Keyword(s):  
Nitrogen Fixation ◽  
Genome Sequence ◽  
Mine Tailings ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Sulfur Oxidation ◽  
Mercury Resistance ◽  
Inorganic Sulfur ◽  
Duluth Complex ◽  
Sulfur Oxidizing

ABSTRACT We report the closed and annotated genome sequence of Sulfuriferula sp. strain AH1. Strain AH1 has a 2,877,007-bp chromosome that includes a partial Sox system for inorganic sulfur oxidation and a complete nitrogen fixation pathway. It also has a single 39,138-bp plasmid with genes for arsenic and mercury resistance.

scholarly journals Analysis of the Complete Genome Sequence of the Widely Studied Strain Bradyrhizobium betae PL7HG1T Reveals the Presence of Photosynthesis Genes and a Putative Plasmid

2019 ◽  
Vol 8 (46) ◽  
Author(s):  
Sylvie Cloutier ◽  
Eden S. P. Bromfield
Keyword(s):  
Nitrogen Fixation ◽  
Sugar Beet ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Circular Chromosome ◽  
Content Type ◽  
Photosynthesis Genes

Here, we present the complete genome sequence of the widely studied strain Bradyrhizobium betae PL7HG1T, isolated from a tumor on the roots of sugar beet. The genome consists of a 7.2-Mbp circular chromosome containing key photosynthesis genes but not genes for nodulation and nitrogen fixation. A putative plasmid was also detected.

Stable symbiotic nitrogen fixation under water-deficit field conditions by a stress-tolerant alfalfa microsymbiont and its complete genome sequence

2017 ◽  
Vol 263 ◽  
pp. 52-54 ◽  
Author(s):  
Cintia Jozefkowicz ◽  
Silvina Brambilla ◽  
Romina Frare ◽  
Margarita Stritzler ◽  
Carlos Piccinetti ◽  
...  
Keyword(s):  
Nitrogen Fixation ◽  
Water Deficit ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Symbiotic Nitrogen Fixation ◽  
Field Conditions

scholarly journals Complete Genome Sequence ofKlebsiella pneumoniaeYH43

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Tadayuki Iwase ◽  
Yoshitoshi Ogura ◽  
Tetsuya Hayashi ◽  
Yoshimitsu Mizunoe
Keyword(s):  
Nitrogen Fixation ◽  
Klebsiella Pneumoniae ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Trna Genes ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Protein Coding Genes ◽  
Single Circular Chromosome

We report here the complete genome sequence ofKlebsiella pneumoniaestrain YH43, isolated from sweet potato. The genome consists of a single circular chromosome of 5,520,319 bp in length. It carries 8 copies of rRNA operons, 86 tRNA genes, 5,154 protein-coding genes, and thenifgene cluster for nitrogen fixation.

scholarly journals Complete Genome Sequence of Herbaspirillum hiltneri N3 (DSM 17495), Isolated from Surface-Sterilized Wheat Roots

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Dieval Guizelini ◽  
Paula M. Saizaki ◽  
Nilson A. R. Coimbra ◽  
Vinicius A. Weiss ◽  
Helisson Faoro ◽  
...  
Keyword(s):  
Nitrogen Fixation ◽  
Gene Cluster ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Wheat Roots ◽  
Single Chromosome

We report the complete genome sequence of Herbaspirillum hiltneri N3 (DSM 17495), a member of the genus Herbaspirillum of the Betaproteobacteria . The genome is contained in a single chromosome, and analysis revealed that N3 lacks the whole nitrogen fixation ( nif ) gene cluster, confirming its inability to fix nitrogen.

scholarly journals Complete Genome Sequence of the Photosynthetic Purple Nonsulfur Bacterium Rhodobacter capsulatus SB 1003

2010 ◽  
Vol 192 (13) ◽  
pp. 3545-3546 ◽  
Author(s):  
Hynek Strnad ◽  
Alla Lapidus ◽  
Jan Paces ◽  
Pavel Ulbrich ◽  
Cestmir Vlcek ◽  
...  
Keyword(s):  
Nitrogen Fixation ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Rhodobacter Capsulatus ◽  
Research Tool ◽  
Organic Substrates ◽  
Purple Nonsulfur Bacteria ◽  
Purple Nonsulfur Bacterium

ABSTRACT Rhodobacter capsulatus SB 1003 belongs to the group of purple nonsulfur bacteria. Its genome consists of a 3.7-Mb chromosome and a 133-kb plasmid. The genome encodes genes for photosynthesis, nitrogen fixation, utilization of xenobiotic organic substrates, and synthesis of polyhydroxyalkanoates. These features made it a favorite research tool for studying these processes. Here we report its complete genome sequence.

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