scholarly journals Untangling cross-frequency coupling in neuroscience

2014 ◽  
Author(s):  
Juhan Aru ◽  
Jaan Aru ◽  
Viola Priesemann ◽  
Michael Wibral ◽  
Luiz Lana ◽  
...  

AbstractCross-frequency coupling (CFC) has been proposed to coordinate neural dynamics across spatial and temporal scales. Despite its potential relevance for understanding healthy and pathological brain function, the standard CFC analysis and physiological interpretation come with fundamental problems. For example, apparent CFC can appear because of spectral correlations due to common non-stationarities that may arise in the total absence of interactions between neural frequency components. To provide a road map towards an improved mechanistic understanding of CFC, we organize the available and potential novel statistical/modeling approaches according to their biophysical interpretability. While we do not provide solutions for all the problems described, we provide a list of practical recommendations to avoid common errors and to enhance the interpretability of CFC analysis.HighlightsFundamental caveats and confounds in the methodology of assessing CFC are discussed.Significant CFC can be observed without any underlying physiological coupling.Non-stationarity of a time-series leads to spectral correlations interpreted as CFC.We offer practical recommendations, which can relieve some of the current confounds.Further theoretical and experimental work is needed to ground the CFC analysis.

2017 ◽  
Vol 13 (12) ◽  
pp. e1005893 ◽  
Author(s):  
Tom Dupré la Tour ◽  
Lucille Tallot ◽  
Laetitia Grabot ◽  
Valérie Doyère ◽  
Virginie van Wassenhove ◽  
...  

2020 ◽  
Vol 4 (1) ◽  
pp. 1-29 ◽  
Author(s):  
Sepideh Sadaghiani ◽  
Jonathan Wirsich

The discovery of a stable, whole-brain functional connectivity organization that is largely independent of external events has drastically extended our view of human brain function. However, this discovery has been primarily based on functional magnetic resonance imaging (fMRI). The role of this whole-brain organization in fast oscillation-based connectivity as measured, for example, by electroencephalography (EEG) and magnetoencephalography (MEG) is only beginning to emerge. Here, we review studies of intrinsic connectivity and its whole-brain organization in EEG, MEG, and intracranial electrophysiology with a particular focus on direct comparisons to connectome studies in fMRI. Synthesizing this literature, we conclude that irrespective of temporal scale over four orders of magnitude, intrinsic neurophysiological connectivity shows spatial similarity to the connectivity organization commonly observed in fMRI. A shared structural connectivity basis and cross-frequency coupling are possible mechanisms contributing to this similarity. Acknowledging that a stable whole-brain organization governs long-range coupling across all timescales of neural processing motivates researchers to take “baseline” intrinsic connectivity into account when investigating brain-behavior associations, and further encourages more widespread exploration of functional connectomics approaches beyond fMRI by using EEG and MEG modalities.


2017 ◽  
Author(s):  
Tom Dupré la Tour ◽  
Lucille Tallot ◽  
Laetitia Grabot ◽  
Valérie Doyère ◽  
Virginie van Wassenhove ◽  
...  

AbstractWe address the issue of reliably detecting and quantifying cross-frequency coupling (CFC) in neural time series. Based on non-linear auto-regressive models, the proposed method provides a generative and parametric model of the time-varying spectral content of the signals. As this method models the entire spectrum simultaneously, it avoids the pitfalls related to incorrect filtering or the use of the Hilbert transform on wide-band signals. As the model is probabilistic, it also provides a score of the model “goodness of fit” via the likelihood, enabling easy and legitimate model selection and parameter comparison; this data-driven feature is unique to our model-based approach. Using three datasets obtained with invasive neurophysiological recordings in humans and rodents, we demonstrate that these models are able to replicate previous results obtained with other metrics, but also reveal new insights such as the influence of the amplitude of the slow oscillation. Using simulations, we demonstrate that our parametric method can reveal neural couplings with shorter signals than non-parametric methods. We also show how the likelihood can be used to find optimal filtering parameters, suggesting new properties on the spectrum of the driving signal, but also to estimate the optimal delay between the coupled signals, enabling a directionality estimation in the coupling.Author SummaryNeural oscillations synchronize information across brain areas at various anatomical and temporal scales. Of particular relevance, slow fluctuations of brain activity have been shown to affect high frequency neural activity, by regulating the excitability level of neural populations. Such cross-frequency-coupling can take several forms. In the most frequently observed type, the power of high frequency activity is time-locked to a specific phase of slow frequency oscillations, yielding phase-amplitude-coupling (PAC). Even when readily observed in neural recordings, such non-linear coupling is particularly challenging to formally characterize. Typically, neuroscientists use band-pass filtering and Hilbert transforms with ad-hoc correlations. Here, we explicitly address current limitations and propose an alternative probabilistic signal modeling approach, for which statistical inference is fast and well-posed. To statistically model PAC, we propose to use non-linear auto-regressive models which estimate the spectral modulation of a signal conditionally to a driving signal. This conditional spectral analysis enables easy model selection and clear hypothesis-testing by using the likelihood of a given model. We demonstrate the advantage of the model-based approach on three datasets acquired in rats and in humans. We further provide novel neuroscientific insights on previously reported PAC phenomena, capturing two mechanisms in PAC: influence of amplitude and directionality estimation.


2018 ◽  
Author(s):  
Alex Sheremet ◽  
Yuchen Zhou ◽  
Jack P. Kennedy ◽  
Yu Qin ◽  
Sara N. Burke ◽  
...  

AbstractCross-frequency coupling in the hippocampus has been hypothesized to support higher-cognition functions. While gamma modulation by theta is widely accepted, evidence of phase-coupling between the two frequency components is so far unconvincing. Our observations show that theta and gamma energy increases with rat speed, while the overall nonlinearity of the LFP trace also increases, suggesting that energy flow is fundamental for hippocampal dynamics. This contradicts current representations based on the Kuramoto phase model. Therefore, we propose a new approach, based on the three-wave equation, a universally-valid nonlinear-physics paradigm that synthesizes the effects of leading order, quadratic nonlinearity. The paradigm identifies bispectral analysis as the natural tool for investigating LFP cross-frequency coupling. Our results confirm the effectiveness of the approach by showing unambiguous coupling between theta and gamma. Bispectra features agree with predictions of the three-wave model, supporting the conclusion that cross-frequency coupling is a manifestation of nonlinear energy transfers.


2020 ◽  
Vol 14 ◽  
Author(s):  
Antonio José Ibáñez-Molina ◽  
María Felipa Soriano ◽  
Sergio Iglesias-Parro

Electroencephalograms (EEG) are one of the most commonly used measures to study brain functioning at a macroscopic level. The structure of the EEG time series is composed of many neural rhythms interacting at different spatiotemporal scales. This interaction is often named as cross frequency coupling, and consists of transient couplings between various parameters of different rhythms. This coupling has been hypothesized to be a basic mechanism involved in cognitive functions. There are several methods to measure cross frequency coupling between two rhythms but no single method has been selected as the gold standard. Current methods only serve to explore two rhythms at a time, are computationally demanding, and impose assumptions about the nature of the signal. Here we present a new approach based on Information Theory in which we can characterize the interaction of more than two rhythms in a given EEG time series. It estimates the mutual information of multiple rhythms (MIMR) extracted from the original signal. We tested this measure using simulated and real empirical data. We simulated signals composed of three frequencies and background noise. When the coupling between each frequency component was manipulated, we found a significant variation in the MIMR. In addition, we found that MIMR was sensitive to real EEG time series collected with open vs. closed eyes, and intra-cortical recordings from epileptic and non-epileptic signals registered at different regions of the brain. MIMR is presented as a tool to explore multiple rhythms, easy to compute and without a priori assumptions.


2017 ◽  
Author(s):  
Elliot Murphy ◽  
Antonio Benítez-Burraco

AbstractLanguage has been argued to arise, both ontogenetically and phylogenetically, from specific patterns of brain wiring. We argue that it can further be shown that core features of language processing emerge from particular phasal and cross-frequency coupling properties of neural oscillations; what has been referred to as the language ‘oscillome’. It is expected that basic aspects of the language oscillome result from genetic guidance, what we will here call the language ‘oscillogenome’, for which we will put forward a list of candidate genes. We have considered genes for altered brain rhythmicity in conditions involving language deficits (autism spectrum disorders, schizophrenia, specific language impairment and dyslexia) for which we have confident genome-oscillome-phenome connections. These selected genes map on to aspects of brain function, particularly on to neurotransmitter function. Our aim is to propose a set of biologically robust genome-to-language linking hypotheses that, given testing, would grant causal and explanatory power to brain rhythms with respect to language processing.


2015 ◽  
Vol 2015 ◽  
pp. 1-8 ◽  
Author(s):  
Kyle Q. Lepage ◽  
Sujith Vijayan

Stochastic processes that exhibit cross-frequency coupling (CFC) are introduced. The ability of these processes to model observed CFC in neural recordings is investigated by comparison with published spectra. One of the proposed models, based on multiplying a pulsatile function of a low-frequency oscillation (θ) with an unobserved and high-frequency component, yields a process with a spectrum that is consistent with observation. Other models, such as those employing a biphasic pulsatile function of a low-frequency oscillation, are demonstrated to be less suitable. We introduce the full stochastic process time series model as a summation of three component weak-sense stationary (WSS) processes, namely,θ,γ, andη, withηa1/fαnoise process. Theγprocess is constructed as a product of a latent and unobserved high-frequency processxwith a function of the lagged, low-frequency oscillatory component (θ). After demonstrating that the model process is WSS, an appropriate method of simulation is introduced based upon the WSS property. This work may be of interest to researchers seeking to connect inhibitory and excitatory dynamics directly to observation in a model that accounts for known temporal dependence or to researchers seeking to examine what can occur in a multiplicative time-domain CFC mechanism.


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