scholarly journals An NLR Integrated Domain toolkit to identify plant pathogen effector targets

2021 ◽  
Author(s):  
David Landry ◽  
Isabelle Mila ◽  
Cyrus Raja Rubenstein Sabbagh ◽  
Matilda Zaffuto ◽  
Cécile Pouzet ◽  
...  
Keyword(s):  
Resistance Genes ◽  
Plant Resistance ◽  
Plant Pathogen ◽  
Imaging Method ◽  
Wrky Domain ◽  
Living Plant ◽  
Type Iii Effectors ◽  
Type Iii ◽  
Pathogen Effectors ◽  
Pathogen Effector

SUMMARYPlant resistance genes (or NLR “Nod-like Receptors”) are known to contain atypical domains procuring them with a decoy capacity. Some of these integrated domains (or ID) allow the plant to lure the virulence determinants (“effectors”) of pathogens and triggering a specific NLR immune reaction.In this work, our goal was to generate a library of known IDs that could be screened with plant pathogen effectors in order to identify putative new effector virulence targets and NLR-effector pairs.We curated the IDs contained in NLRs from seven model and crop plant species. We cloned 52 IDs representing 31 distinct Pfam domains. This library was screened for interaction by yeast-two-hybrid with a set of 31 conserved Ralstonia solanacearum type III effectors. This screening and the further in planta interaction assay allowed us to identify three interactions, involving different IDs (kinase, DUF3542, WRKY) and two type III effectors (RipAE and PopP2).PopP2 was found to physically interact with ID#85, an atypical WRKY domain integrated in the GmNLR-ID85 NLR protein from Soybean. Using a imaging method in living plant cells, we showed that PopP2 associates with ID#85 in the nucleus. But unlike the known WRKY-containing Arabidopsis RRS1-R NLR receptor, this newly identified soybean WRKY domain could not be acetylated by PopP2 and its atypical sequence (WRKYGKR) also probably renders it inefficient in plant immunity triggering.This ID toolkit is available for screening with other plant pathogen effectors and should prove useful to discover new effectors targets and potentially engineer new plant resistance genes.

scholarly journals Allelic Variants of the Pseudomonas syringae Type III Effector HopZ1 Are Differentially Recognized by Plant Resistance Systems

2009 ◽  
Vol 22 (2) ◽  
pp. 176-189 ◽  
Author(s):  
Huanbin Zhou ◽  
Robyn L. Morgan ◽  
David S. Guttman ◽  
Wenbo Ma
Keyword(s):  
Cell Death ◽  
Pseudomonas Syringae ◽  
Plant Resistance ◽  
Type Iii Secretion ◽  
Defense Responses ◽  
Plant Defense Responses ◽  
Type Iii Effectors ◽  
Type Iii ◽  
New Evidence ◽  
Bacterial Plant Pathogen

The bacterial plant pathogen Pseudomonas syringae depends on the type III secretion system and type III-secreted effectors to cause disease in plants. HopZ is a diverse family of type III effectors widely distributed in P. syringae isolates. Among the HopZ homologs, HopZ1 is ancient to P. syringae and has been shown to be under strong positive selection driven by plant resistance-imposed selective pressure. Here, we characterized the virulence and avirulence functions of the three HopZ1 alleles in soybean and Nicotiana benthamiana. In soybean, HopZ1 alleles have distinct functions: HopZ1a triggers defense response, HopZ1b promotes bacterial growth, and HopZ1c has no observable effect. In N. benthamiana, HopZ1a and HopZ1b both induce plant defense responses. However, they appear to trigger different resistance pathways, evidenced by two major differences between HopZ1a- and HopZ1b-triggered hypersensitive response (HR): i) the putative N-acylation sites had no effect on HopZ1a-triggered cell death, whereas it greatly enhanced HopZ1b-triggered cell death; and ii) the HopZ1b-triggered HR, but not the HopZ1a-triggered HR, was suppressed by another HopZ homolog, HopZ3. We previously demonstrated that HopZ1a most resembled the ancestral allelic form of HopZ1; therefore, this new evidence suggested that differentiated resistance systems have evolved in plant hosts to adapt to HopZ1 diversification in P. syringae.

scholarly journals The tomato Pto gene confers resistance to Pseudomonas floridensis , an emergent plant pathogen with just nine type III effectors

2019 ◽  
Vol 68 (5) ◽  
pp. 977-984
Author(s):  
N. Eckshtain‐Levi ◽  
M. Lindeberg ◽  
G. E. Vallad ◽  
G. B. Martin
Keyword(s):  
Plant Pathogen ◽  
Type Iii Effectors ◽  
Type Iii

scholarly journals Pathogen effector recognition-dependent association of NRG1 with EDS1 and SAG101 in TNL receptor immunity

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Xinhua Sun ◽  
Dmitry Lapin ◽  
Joanna M. Feehan ◽  
Sara C. Stolze ◽  
Katharina Kramer ◽  
...  
Keyword(s):  
Disease Susceptibility ◽  
Nucleotide Binding ◽  
Molecular Evidence ◽  
Pathogen Effectors ◽  
Pathogen Effector ◽  
Family Protein ◽  
Activated State ◽  
Defence Signalling ◽  
Effector Recognition ◽  
Dependent Interaction

AbstractPlants utilise intracellular nucleotide-binding, leucine-rich repeat (NLR) immune receptors to detect pathogen effectors and activate local and systemic defence. NRG1 and ADR1 “helper” NLRs (RNLs) cooperate with enhanced disease susceptibility 1 (EDS1), senescence-associated gene 101 (SAG101) and phytoalexin-deficient 4 (PAD4) lipase-like proteins to mediate signalling from TIR domain NLR receptors (TNLs). The mechanism of RNL/EDS1 family protein cooperation is not understood. Here, we present genetic and molecular evidence for exclusive EDS1/SAG101/NRG1 and EDS1/PAD4/ADR1 co-functions in TNL immunity. Using immunoprecipitation and mass spectrometry, we show effector recognition-dependent interaction of NRG1 with EDS1 and SAG101, but not PAD4. An EDS1-SAG101 complex interacts with NRG1, and EDS1-PAD4 with ADR1, in an immune-activated state. NRG1 requires an intact nucleotide-binding P-loop motif, and EDS1 a functional EP domain and its partner SAG101, for induced association and immunity. Thus, two distinct modules (NRG1/EDS1/SAG101 and ADR1/EDS1/PAD4) mediate TNL receptor defence signalling.

scholarly journals Identification of type III effectors modulating the symbiotic properties of Bradyrhizobium vignae strain ORS3257 with various Vigna species

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Pongpan Songwattana ◽  
Clémence Chaintreuil ◽  
Jenjira Wongdee ◽  
Albin Teulet ◽  
Mamadou Mbaye ◽  
...  
Keyword(s):  
Positive Impact ◽  
Symbiotic Efficiency ◽  
Type Iii Effectors ◽  
Type Iii ◽  
Vigna Species ◽  
Symbiotic Properties

AbstractThe Bradyrhizobium vignae strain ORS3257 is an elite strain recommended for cowpea inoculation in Senegal. This strain was recently shown to establish symbioses on some Aeschynomene species using a cocktail of Type III effectors (T3Es) secreted by the T3SS machinery. In this study, using a collection of mutants in different T3Es genes, we sought to identify the effectors that modulate the symbiotic properties of ORS3257 in three Vigna species (V. unguiculata, V. radiata and V. mungo). While the T3SS had a positive impact on the symbiotic efficiency of the strain in V. unguiculata and V. mungo, it blocked symbiosis with V. radiata. The combination of effectors promoting nodulation in V. unguiculata and V. mungo differed, in both cases, NopT and NopAB were involved, suggesting they are key determinants for nodulation, and to a lesser extent, NopM1 and NopP1, which are additionally required for optimal symbiosis with V. mungo. In contrast, only one effector, NopP2, was identified as the cause of the incompatibility between ORS3257 and V. radiata. The identification of key effectors which promote symbiotic efficiency or render the interaction incompatible is important for the development of inoculation strategies to improve the growth of Vigna species cultivated in Africa and Asia.

scholarly journals The Proteasome Acts as a Hub for Plant Immunity and Is Targeted by Pseudomonas Type III Effectors

2016 ◽  
Vol 172 (3) ◽  
pp. 1941-1958 ◽  
Author(s):  
Suayib Üstün ◽  
Arsheed Sheikh ◽  
Selena Gimenez-Ibanez ◽  
Alexandra Jones ◽  
Vardis Ntoukakis ◽  
...  
Keyword(s):  
Plant Immunity ◽  
Type Iii Effectors ◽  
Type Iii

scholarly journals A Receptor-like Cytoplasmic Kinase Targeted by a Plant Pathogen Effector Is Directly Phosphorylated by the Chitin Receptor and Mediates Rice Immunity

2013 ◽  
Vol 13 (3) ◽  
pp. 347-357 ◽  
Author(s):  
Koji Yamaguchi ◽  
Kenta Yamada ◽  
Kazuya Ishikawa ◽  
Satomi Yoshimura ◽  
Nagao Hayashi ◽  
...  
Keyword(s):  
Plant Pathogen ◽  
Pathogen Effector ◽  
Chitin Receptor

scholarly journals Dynamic accumulation of a helper NLR at the plant-pathogen interface underpins pathogen recognition

2021 ◽  
Author(s):  
Cian Duggan ◽  
Eleonora Moratto ◽  
Zachary Savage ◽  
Eranthika Hamilton ◽  
Hiroaki Adachi ◽  
...  
Keyword(s):  
Plasma Membrane ◽  
Immune Responses ◽  
Subcellular Localization ◽  
Plant Pathogen ◽  
Coiled Coil ◽  
Dynamic Changes ◽  
Pathogen Effectors ◽  
Mediate Response ◽  
Potato Famine ◽  
Irish Potato Famine

Plants employ sensor-helper pairs of NLR immune receptors to recognize pathogen effectors and activate immune responses. Yet the subcellular localization of NLRs pre- and post- activation during pathogen infection remains poorly known. Here we show that NRC4, from the 'NRC' solanaceous helper NLR family, undergoes dynamic changes in subcellular localization by shuttling to and from the plant-pathogen haustorium interface established during infection by the Irish potato famine pathogen Phytophthora infestans. Specifically, prior to activation, NRC4 accumulates at the extra-haustorial membrane (EHM), presumably to mediate response to perihaustorial effectors, that are recognized by NRC4-dependent sensor NLRs. However not all NLRs accumulate at the EHM, as the closely related helper NRC2, and the distantly related ZAR1, did not accumulate at the EHM. NRC4 required an intact N- terminal coiled coil domain to accumulate at the EHM, whereas the functionally conserved MADA motif implicated in cell death activation and membrane insertion was dispensable for this process. Strikingly, a constitutively autoactive NRC4 mutant did not accumulate at the EHM and showed punctate distribution that mainly associated with the plasma membrane, suggesting that post-activation, NRC4 probably undergoes a conformation switch to form clusters that do not preferentially associate with the EHM. When NRC4 is activated by a sensor NLR during infection however, NRC4 formed puncta mainly at the EHM and to a lesser extent at the plasma membrane. We conclude that following activation at the EHM, NRC4 may spread to other cellular membranes from its primary site of activation to trigger immune responses.

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