scholarly journals Spatial effects in parasite induced marine diseases of immobile hosts

2021 ◽  
Author(s):  
Alex Gimenez-Romero ◽  
Federico Vazquez ◽  
Cristobal Lopez ◽  
Manuel A Matias
Keyword(s):  
Basic Reproduction Number ◽  
Disease Transmission ◽  
Spatial Model ◽  
Reproduction Number ◽  
Large Fraction ◽  
Common Mechanism ◽  
Anthropogenic Pressures ◽  
Analytical Approximations ◽  
The Impact ◽  
The Basic Reproduction Number

Marine infectious diseases are more prevalent in recent times due to climate change and other anthropogenic pressures, posing a substantial threat to marine ecosystems and the conservation of their biodiversity. An important subset of marine organisms are sessile, for which the most common mechanism for disease transmission is direct contact with waterborne parasites. Only recently, some deterministic compartmental models have been proposed to describe this kind of epidemics, being these models based on non-spatial descriptions where space is homogenised and parasite mobility is not explicitly accounted for. However, in realistic situations, epidemic transmission is conditioned by the spatial distribution of hosts and the parasites mobility patterns. Thus, the interplay between these factors is expected to have a crucial effect in the evolution of the epidemic, so calling for a explicit description of space. In this work we develop a spatially-explicit individual-based model to study disease transmission by waterborne parasites in sessile marine populations. We investigate the impact of spatial disease transmission, performing extensive numerical simulations and analytical approximations. Specifically, the effects of parasite mobility into the epidemic threshold and the temporal evolution of the epidemic are assessed. We show that larger values of pathogen mobility have two main implications: more severe epidemics, as the number of infections increases, and shorter time-scales to extinction. Moreover, an analytical expression for the basic reproduction number of the spatial model, is derived as function of the non-spatial counterpart, which characterises a transition between a disease-free and a propagation phase, in which the disease propagates over a large fraction of the system. This allows to determine a phase diagram for the epidemic model as function of the parasite mobility and the basic reproduction number of the non-spatial model.

A THEORETICAL ASSESSMENT OF THE EFFECTS OF DISTRIBUTED DELAY ON THE TRANSMISSION DYNAMICS OF HEPATITIS B

2015 ◽  
Vol 23 (03) ◽  
pp. 423-455
Author(s):  
P. MOUOFO TCHINDA ◽  
JEAN JULES TEWA ◽  
BOULECHARD MEWOLI ◽  
SAMUEL BOWONG
Keyword(s):  
Drug Therapy ◽  
Hepatitis B ◽  
Basic Reproduction Number ◽  
Disease Transmission ◽  
Time Delays ◽  
Reproduction Number ◽  
Distributed Delay ◽  
Global Dynamics ◽  
The Impact ◽  
The Basic Reproduction Number

In this paper, we investigate the global dynamics of a system of delay differential equations which describes the interaction of hepatitis B virus (HBV) with both liver and blood cells. The model has two distributed time delays describing the time needed for infection of cell and virus replication. We also include the efficiency of drug therapy in inhibiting viral production and the efficiency of drug therapy in blocking new infection. We compute the basic reproduction number and find that increasing delays will decrease the value of the basic reproduction number. We study the sensitivity analysis on the key parameters that drive the disease dynamics in order to determine their relative importance to disease transmission and prevalence. Our analysis reveals that the model exhibits the phenomenon of backward bifurcation (where a stable disease-free equilibrium (DFE) co-exists with a stable endemic equilibrium when the basic reproduction number is less than unity). Numerical simulations are presented to evaluate the impact of time-delays on the prevalence of the disease.

scholarly journals Rich Dynamics of an Epidemic Model with Saturation Recovery

2013 ◽  
Vol 2013 ◽  
pp. 1-9 ◽  
Author(s):  
Hui Wan ◽  
Jing-an Cui
Keyword(s):  
Basic Reproduction Number ◽  
Epidemic Model ◽  
Disease Transmission ◽  
Reproduction Number ◽  
Basic Reproductive Number ◽  
Reproductive Number ◽  
Medical Resource ◽  
Sir Epidemic Model ◽  
The Impact ◽  
The Basic Reproduction Number

A SIR epidemic model is proposed to understand the impact of limited medical resource on infectious disease transmission. The basic reproduction number is identified. Existence and stability of equilibria are obtained under different conditions. Bifurcations, including backward bifurcation and Hopf bifurcation, are analyzed. Our results suggest that the model considering the impact of limited medical resource may exhibit vital dynamics, such as bistability and periodicity when the basic reproduction numberℝ0is less than unity, which implies that the basic reproductive number itself is not enough to describe whether the disease will prevail or not and a subthreshold number is needed. It is also shown that a sufficient number of sickbeds and other medical resources are very important for disease control and eradication. Considering the costs, we provide a method to estimate a suitable treatment capacity for a disease in a region.

scholarly journals The effects of non-pharmaceutical interventions on SARS-CoV-2 transmission in different socioeconomic populations in Kuwait: a modeling study

2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Fatima Khadadah ◽  
Abdullah A. Al-Shammari ◽  
Ahmad Alhashemi ◽  
Dari Alhuwail ◽  
Bader Al-Saif ◽  
...  
Keyword(s):  
Disease Transmission ◽  
Reproduction Number ◽  
Transmission Model ◽  
Socioeconomic Groups ◽  
Before And After ◽  
Cross Transmission ◽  
Community Transmission ◽  
The Impact ◽  
Pharmaceutical Interventions ◽  
The Basic Reproduction Number

Abstract Background Aggressive non-pharmaceutical interventions (NPIs) may reduce transmission of SARS-CoV-2. The extent to which these interventions are successful in stopping the spread have not been characterized in countries with distinct socioeconomic groups. We compared the effects of a partial lockdown on disease transmission among Kuwaitis (P1) and non-Kuwaitis (P2) living in Kuwait. Methods We fit a modified metapopulation SEIR transmission model to reported cases stratified by two groups to estimate the impact of a partial lockdown on the effective reproduction number ($$ {\mathcal{R}}_e $$ R e ). We estimated the basic reproduction number ($$ {\mathcal{R}}_0 $$ R 0 ) for the transmission in each group and simulated the potential trajectories of an outbreak from the first recorded case of community transmission until 12 days after the partial lockdown. We estimated $$ {\mathcal{R}}_e $$ R e values of both groups before and after the partial curfew, simulated the effect of these values on the epidemic curves and explored a range of cross-transmission scenarios. Results We estimate $$ {\mathcal{R}}_e $$ R e at 1·08 (95% CI: 1·00–1·26) for P1 and 2·36 (2·03–2·71) for P2. On March 22nd, $$ {\mathcal{R}}_e $$ R e for P1 and P2 are estimated at 1·19 (1·04–1·34) and 1·75 (1·26–2·11) respectively. After the partial curfew had taken effect, $$ {\mathcal{R}}_e $$ R e for P1 dropped modestly to 1·05 (0·82–1·26) but almost doubled for P2 to 2·89 (2·30–3·70). Our simulated epidemic trajectories show that the partial curfew measure greatly reduced and delayed the height of the peak in P1, yet significantly elevated and hastened the peak in P2. Modest cross-transmission between P1 and P2 greatly elevated the height of the peak in P1 and brought it forward in time closer to the peak of P2. Conclusion Our results indicate and quantify how the same lockdown intervention can accentuate disease transmission in some subpopulations while potentially controlling it in others. Any such control may further become compromised in the presence of cross-transmission between subpopulations. Future interventions and policies need to be sensitive to socioeconomic and health disparities.

scholarly journals Threshold Dynamics of a Huanglongbing Model with Logistic Growth in Periodic Environments

2014 ◽  
Vol 2014 ◽  
pp. 1-10 ◽  
Author(s):  
Jianping Wang ◽  
Shujing Gao ◽  
Yueli Luo ◽  
Dehui Xie
Keyword(s):  
Basic Reproduction Number ◽  
Reproduction Number ◽  
Logistic Growth ◽  
Threshold Dynamics ◽  
Global Dynamics ◽  
Globally Asymptotically Stable ◽  
Linear Integral ◽  
The Impact ◽  
Disease Free ◽  
The Basic Reproduction Number

We analyze the impact of seasonal activity of psyllid on the dynamics of Huanglongbing (HLB) infection. A new model about HLB transmission with Logistic growth in psyllid insect vectors and periodic coefficients has been investigated. It is shown that the global dynamics are determined by the basic reproduction numberR0which is defined through the spectral radius of a linear integral operator. IfR0< 1, then the disease-free periodic solution is globally asymptotically stable and ifR0> 1, then the disease persists. Numerical values of parameters of the model are evaluated taken from the literatures. Furthermore, numerical simulations support our analytical conclusions and the sensitive analysis on the basic reproduction number to the changes of average and amplitude values of the recruitment function of citrus are shown. Finally, some useful comments on controlling the transmission of HLB are given.

scholarly journals On an SEIR Epidemic Model with Vaccination of Newborns and Periodic Impulsive Vaccination with Eventual On-Line Adapted Vaccination Strategies to the Varying Levels of the Susceptible Subpopulation

2020 ◽  
Vol 10 (22) ◽  
pp. 8296 ◽  
Author(s):  
Malen Etxeberria-Etxaniz ◽  
Santiago Alonso-Quesada ◽  
Manuel De la Sen
Keyword(s):  
Equilibrium Point ◽  
Basic Reproduction Number ◽  
Epidemic Model ◽  
Disease Transmission ◽  
Reproduction Number ◽  
Equilibrium Points ◽  
Endemic Equilibrium ◽  
Impulsive Vaccination ◽  
Disease Free ◽  
The Basic Reproduction Number

This paper investigates a susceptible-exposed-infectious-recovered (SEIR) epidemic model with demography under two vaccination effort strategies. Firstly, the model is investigated under vaccination of newborns, which is fact in a direct action on the recruitment level of the model. Secondly, it is investigated under a periodic impulsive vaccination on the susceptible in the sense that the vaccination impulses are concentrated in practice in very short time intervals around a set of impulsive time instants subject to constant inter-vaccination periods. Both strategies can be adapted, if desired, to the time-varying levels of susceptible in the sense that the control efforts be increased as those susceptible levels increase. The model is discussed in terms of suitable properties like the positivity of the solutions, the existence and allocation of equilibrium points, and stability concerns related to the values of the basic reproduction number. It is proven that the basic reproduction number lies below unity, so that the disease-free equilibrium point is asymptotically stable for larger values of the disease transmission rates under vaccination controls compared to the case of absence of vaccination. It is also proven that the endemic equilibrium point is not reachable if the disease-free one is stable and that the disease-free equilibrium point is unstable if the reproduction number exceeds unity while the endemic equilibrium point is stable. Several numerical results are investigated for both vaccination rules with the option of adapting through ime the corresponding efforts to the levels of susceptibility. Such simulation examples are performed under parameterizations related to the current SARS-COVID 19 pandemic.

scholarly journals Seasonality Impact on the Transmission Dynamics of Tuberculosis

2016 ◽  
Vol 2016 ◽  
pp. 1-12 ◽  
Author(s):  
Yali Yang ◽  
Chenping Guo ◽  
Luju Liu ◽  
Tianhua Zhang ◽  
Weiping Liu
Keyword(s):  
Basic Reproduction Number ◽  
Reproduction Number ◽  
Autonomous Systems ◽  
Positive Periodic Solution ◽  
Transmission Dynamics ◽  
Uniform Persistence ◽  
Globally Asymptotically Stable ◽  
The Impact ◽  
Disease Free ◽  
The Basic Reproduction Number

The statistical data of monthly pulmonary tuberculosis (TB) incidence cases from January 2004 to December 2012 show the seasonality fluctuations in Shaanxi of China. A seasonality TB epidemic model with periodic varying contact rate, reactivation rate, and disease-induced death rate is proposed to explore the impact of seasonality on the transmission dynamics of TB. Simulations show that the basic reproduction number of time-averaged autonomous systems may underestimate or overestimate infection risks in some cases, which may be up to the value of period. The basic reproduction number of the seasonality model is appropriately given, which determines the extinction and uniform persistence of TB disease. If it is less than one, then the disease-free equilibrium is globally asymptotically stable; if it is greater than one, the system at least has a positive periodic solution and the disease will persist. Moreover, numerical simulations demonstrate these theorem results.

THEORETICAL INVESTIGATION OF THE IMPACT ON EPIDEMIC THRESHOLD OF TRAVEL BETWEEN COMMUNITIES OF RESIDENT POPULATIONS

2013 ◽  
Vol 21 (02) ◽  
pp. 1350010 ◽  
Author(s):  
KLOT PATANARAPEELERT ◽  
D. GARCIA LOPEZ ◽  
I-MING TANG ◽  
MARC A. DUBOIS
Keyword(s):  
Basic Reproduction Number ◽  
Epidemic Model ◽  
Initial Phase ◽  
Reproduction Number ◽  
Travel Patterns ◽  
Epidemic Threshold ◽  
Contact Patterns ◽  
Resident Populations ◽  
The Impact ◽  
The Basic Reproduction Number

During the initial phase of an epidemic, individual displacements between different regions modify the contact patterns. Understanding mobility processes and their consequences is necessary to predict the subsequent spread of the disease in order to optimize control policies. The basic reproduction number is commonly used to determine the threshold between extinction and expansion of the disease. Once it is derived for an epidemic model that includes the travel of population between distinct localities, the dependence of the diseases dynamics upon travel rates becomes explicit. In this study, we examine the effects of travel on the epidemic threshold for a model of two communities. The travel rates are treated as varying subject to two scenarios. We show theoretically that if the transmission potentials within communities are moderate, the epidemic threshold can be modified by travel. The conditions for the presence of the threshold induced by travel is determined and the critical values of travel at which the basic reproduction number is equal to one are derived. We show further that these results can also be applied to a model of three communities under specific travel patterns and that the derived basic reproduction number has a form similar to that of the two communities problem.

The impact of media coverage with a piecewise transmission rate in the spread of diseases

2016 ◽  
Vol 10 (01) ◽  
pp. 1750003
Author(s):  
Maoxing Liu ◽  
Lixia Zuo
Keyword(s):  
Basic Reproduction Number ◽  
Media Coverage ◽  
Reproduction Number ◽  
Transmission Rate ◽  
Three Dimensional ◽  
Asymptotically Stable ◽  
Globally Asymptotically Stable ◽  
Contact Transmission ◽  
The Impact ◽  
The Basic Reproduction Number

A three-dimensional compartmental model with media coverage is proposed to describe the real characteristics of its impact in the spread of infectious diseases in a given region. A piecewise continuous transmission rate is introduced to describe that media coverage exhibits its effect only when the number of the infected exceeds a certain critical level. Further, it is assumed that the impact of media coverage on the contact transmission is described by an exponential decreasing factor. Stability analysis of the model shows that the disease-free equilibrium is globally asymptotically stable if the basic reproduction number is less than unity. On the other hand, when the basic reproduction number is greater than unity and media coverage impact is sufficiently small, a unique endemic equilibrium exists, which is globally asymptotically stable.

scholarly journals A prototype vaccination model for endemic Covid-19 under waning immunity and imperfect vaccine take-up

2021 ◽  
Author(s):  
John S Dagpunar ◽  
ChenChen Wu
Keyword(s):  
Basic Reproduction Number ◽  
Vaccine Efficacy ◽  
Reproduction Number ◽  
Vaccine Coverage ◽  
Infection Prevalence ◽  
State Variables ◽  
Susceptible Population ◽  
Waning Immunity ◽  
The Impact ◽  
The Basic Reproduction Number

In this paper, for an infectious disease such as Covid-19, we present a SIR model which examines the impact of waning immunity, vaccination rates, vaccine efficacy, and the proportion of the susceptible population who aspire to be vaccinated. Under an assumed constant control reproduction number, we provide simple conditions for the disease to be eliminated, and conversely for it to exhibit the more likely endemic behaviour. With regard to Covid-19, it is shown that if the control reproduction number is set to the basic reproduction number (say 6) of the dominant delta (B1.617.2) variant, vaccination alone, even under the most optimistic of assumptions about vaccine efficacy and high vaccine coverage, is very unlikely to lead to elimination of the disease. The model is not intended to be predictive but more an aid to understanding the relative importance of various biological and control parameters. For example, from a long-term perspective, it may be found that in the UK, through changes in societal behaviour (such as mask use, ventilation, and level of homeworking), without formal government interventions such as on-off lockdowns, the control reproduction number can still be maintained at a level significantly below the basic reproduction number. Even so, our simulations show that endemic behaviour ensues. The model obtains equilibrium values of the state variables such as the infection prevalence and mortality rate under various scenarios.

scholarly journals Analysis of the Model on the Effect of Seasonal Factors on Malaria Transmission Dynamics

2020 ◽  
Vol 2020 ◽  
pp. 1-19
Author(s):  
Victor Yiga ◽  
Hasifa Nampala ◽  
Julius Tumwiine
Keyword(s):  
Malaria Transmission ◽  
Basic Reproduction Number ◽  
Deterministic Model ◽  
Reproduction Number ◽  
Equilibrium Points ◽  
Current Control ◽  
Transmission Dynamics ◽  
Mosquito Vector ◽  
The Impact ◽  
The Basic Reproduction Number

Malaria is one of the world’s most prevalent epidemics. Current control and eradication efforts are being frustrated by rapid changes in climatic factors such as temperature and rainfall. This study is aimed at assessing the impact of temperature and rainfall abundance on the intensity of malaria transmission. A human host-mosquito vector deterministic model which incorporates temperature and rainfall dependent parameters is formulated. The model is analysed for steady states and their stability. The basic reproduction number is obtained using the next-generation method. It was established that the mosquito population depends on a threshold value θ , defined as the number of mosquitoes produced by a female Anopheles mosquito throughout its lifetime, which is governed by temperature and rainfall. The conditions for the stability of the equilibrium points are investigated, and it is shown that there exists a unique endemic equilibrium which is locally and globally asymptotically stable whenever the basic reproduction number exceeds unity. Numerical simulations show that both temperature and rainfall affect the transmission dynamics of malaria; however, temperature has more influence.

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