scholarly journals Twisted Magnon as a Magnetic Tweezer

2020 ◽  
Vol 124 (21) ◽  
Author(s):  
Yuanyuan Jiang ◽  
H. Y. Yuan ◽  
Z.-X. Li ◽  
Zhenyu Wang ◽  
H. W. Zhang ◽  
...  
Keyword(s):  
2020 ◽  
Author(s):  
Sophia Gruber ◽  
Achim Löf ◽  
Steffen M. Sedlak ◽  
Martin Benoit ◽  
Hermann E. Gaub ◽  
...  

AbstractThe small molecule biotin and the homotetrameric protein streptavidin (SA) form a stable and robust complex that plays a pivotal role in many biotechnological and medical applications. In particular, the biotin-streptavidin linkage is frequently used in single molecule force spectroscopy (SMFS) experiments. Recent data suggest that biotin-streptavidin bonds show strong directional dependence and a broad range of multi-exponential lifetimes under load. Here, we investigate engineered SA variants with different valencies and a unique tethering point under constant forces using a magnetic tweezer assay. We observed two orders-of-magnitude differences in the lifetimes, which we attribute to the distinct force loading geometries in the different SA variants. We identified an especially long-lived tethering geometry that will facilitate ultra-stable SMFS experiments and pave the way for new biotechnological applications.


2019 ◽  
Author(s):  
D. Kah ◽  
C. Dürrbeck ◽  
W. Schneider ◽  
B. Fabry ◽  
R. C. Gerum

ABSTRACTMagnetic tweezers based on solenoids with iron alloy cores are widely used to apply large forces (~100 nN) onto micron-sized (~5 μm) superparamagnetic particles for mechanical manipulation or microrheological measurements at the cellular and molecular level. The precision of magnetic tweezers, however, is limited by the magnetic hysteresis of the core material, especially for time-varying force protocols. Here, we eliminate magnetic hysteresis by a feedback control of the magnetic induction, which we measure with a Hall sensor mounted to the distal end of the solenoid core. We find that the generated force depends on the induction according to a power-law relationship, and on the bead-tip distance according to a stretched exponential relationship. Together, both relationships allow for an accurate force calibration and precise force feedback with only 3 calibration parameters. We apply our method to measure the force-dependence of the viscoelastic and plastic properties of fibroblasts using a protocol with stepwise increasing and decreasing forces. We find that soft cells show an increasing stiffness but decreasing plasticity at higher forces, indicating a pronounced stress stiffening of the cytoskeleton. By contrast, stiff cells show no stress stiffening but an increasing plasticity at higher forces. These findings indicate profound differences between soft and stiff cells regarding their protection mechanisms against external mechanical stress. In summary, our method increases the precision, simplifies the handling and extends the applicability of magnetic tweezers.SIGNIFICANCEMagnetic tweezers are widely used, versatile tools to investigate the mechanical behavior of cells or to measure the strength of receptor-ligand bonds. A limitation of existing high-force magnetic tweezer setups, however, is caused by the magnetic hysteresis of the tweezer core material. This magnetic hysteresis requires that the tweezer core must be de-magnetized (de-Gaussed) prior to each measurement, and that flexible force protocols with decreasing forces are not possible. We describe how these limitations can be overcome with a force feedback though direct magnetic field measurement. We demonstrate the applicability of our setup by investigating the visco-elastic and plastic deformations of fibroblasts to forces of different amplitudes.


2017 ◽  
Vol 66 (18) ◽  
pp. 188701
Author(s):  
Zhao Zhen-Ye ◽  
Xu Chun-Hua ◽  
Li Jing-Hua ◽  
Huang Xing-Yuan ◽  
Ma Jian-Bing ◽  
...  

2010 ◽  
Vol 98 (3) ◽  
pp. 188a
Author(s):  
Christopher P. McAndrew
Keyword(s):  

2016 ◽  
Author(s):  
Eitan Lerner ◽  
SangYoon Chung ◽  
Benjamin L. Allen ◽  
Shuang Wang ◽  
Jookyung J. Lee ◽  
...  

AbstractInitiation is a highly regulated, rate-limiting step in transcription. We employed a series of approaches to examine the kinetics of RNA polymerase (RNAP) transcription initiation in greater detail. Quenched kinetics assays, in combination with magnetic tweezer experiments and other methods, showed that, contrary to expectations, RNAP exit kinetics from later stages of initiation (e.g. from a 7-base transcript) was markedly slower than from earlier stages. Further examination implicated a previously unidentified intermediate in which RNAP adopted a long-lived backtracked state during initiation. In agreement, the RNAP-GreA endonuclease accelerated transcription kinetics from otherwise delayed initiation states and prevented RNAP backtracking. Our results indicate a previously uncharacterized RNAP initiation state that could be exploited for therapeutic purposes and may reflect a conserved intermediate among paused, initiating eukaryotic enzymes.Significance:Transcription initiation by RNAP is rate limiting owing to many factors, including a newly discovered slow initiation pathway characterized by RNA backtracking and pausing. This backtracked and paused state occurs when all NTPs are present in equal amounts, but becomes more prevalent with NTP shortage, which mimics cellular stress conditions. Pausing and backtracking in initiation may play an important role in transcriptional regulation, and similar backtracked states may contribute to pausing among eukaryotic RNA polymerase II enzymes.


Author(s):  
M. L. Chan ◽  
G. M. Jaramillo ◽  
D. A. Horsley

We report the implementation of a magnetic tweezer using an inductive write head from a hard-disk drive for applying forces to micro-magnetic particles in a microscopy setup. Forces are generated by magnetic particles in reaction to the localized fields across the inductive head gap. This allow for mechanical manipulation and measurement of particles in fluid. The displacement is measured through image processing and particle tracking algorithm from the video capture data. We demonstrated the magnetic tweezer system with application to 1-2 μm paramagnetic and 4.5 μm ferromagnetic microparticles and measured forces in the range of 0.1–4 pN.


Author(s):  
Eric M. Furst ◽  
Todd M. Squires

Magnetism is a convenient force for actively pulling colloidal particles in a material. Many materials of interest in a microrheology experiment have a negligible magnetic susceptibility, and so embedded magnetic particles can be subject to relatively strong forces by fields imposed from outside of the sample. These are usually generated by electromagnets, but can also include the use of permanent magnets, or a combination of both. Such “magnetic tweezers” are used as sensitive force probes, capable of generating forces ranging from femtonewtons to nanonewtons. Magnetic forces and magnetic materials are reviewed and magnetic tweezer designs discussed. Linear and non-linear measurements using magnetic tweezers are presented, including studies yield stress and shear thinning. The operating regime of magnetic tweezer microrheology is presented, which enables microrheology experiments to access stiffer materials.


2000 ◽  
Vol 277 (1) ◽  
pp. 93-99 ◽  
Author(s):  
Francis J. Alenghat ◽  
Ben Fabry ◽  
Kenneth Y. Tsai ◽  
Wolfgang H. Goldmann ◽  
Donald E. Ingber

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