scholarly journals High-throughput protein production and purification at the Seattle Structural Genomics Center for Infectious Disease

Author(s):  
Cassie M. Bryan ◽  
Janhavi Bhandari ◽  
Alberto J. Napuli ◽  
David J. Leibly ◽  
Ryan Choi ◽  
...  
Author(s):  
Youngchang Kim ◽  
Robert Jedrzejczak ◽  
Natalia I. Maltseva ◽  
Michael Endres ◽  
Adam Godzik ◽  
...  

ABSTRACTSevere Acute Respiratory Syndrome Coronavirus 2 is rapidly spreading around the world. There is no existing vaccine or proven drug to prevent infections and stop virus proliferation. Although this virus is similar to human and animal SARS- and MERS-CoVs the detailed information about SARS-CoV-2 proteins structures and functions is urgently needed to rapidly develop effective vaccines, antibodies and antivirals. We applied high-throughput protein production and structure determination pipeline at the Center for Structural Genomics of Infectious Diseases to produce SARS-CoV-2 proteins and structures. Here we report the high-resolution crystal structure of endoribonuclease Nsp15/NendoU from SARS-CoV-2 – a virus causing current world-wide epidemics. We compare this structure with previously reported models of Nsp15 from SARS and MERS coronaviruses.


2005 ◽  
Vol 6 (2-3) ◽  
pp. 149-158 ◽  
Author(s):  
Frank J. Sugar ◽  
Francis E. Jenney ◽  
Farris L. Poole ◽  
Phillip S. Brereton ◽  
Michi Izumi ◽  
...  

2010 ◽  
Vol 43 (4) ◽  
pp. 752-756 ◽  
Author(s):  
Sahir Khurshid ◽  
Lesley F. Haire ◽  
Naomi E. Chayen

With the advent of structural genomics a variety of crystallization techniques have been automated and applied to high-throughput pipelines, yet seeding, which is the most common and successful optimization method, is still being performed predominantly manually. The aim of this study was to devise simple automated seeding techniques that can be applied in a routine manner using existing robots and not requiring special tools. Two alternative protocols for automated seeding experiments are described. One involves the delivery of microcrystals from stock to target wells using the robot dispensing tip as a seeding tool. The second harnesses an animal whisker as the seeding tool. Larger and better ordered crystals were obtained using both techniques.


2010 ◽  
Vol 24 (S1) ◽  
Author(s):  
Peter C. Preusch ◽  
Ravi Basavappa ◽  
Jean Chin ◽  
Charles Edmonds ◽  
Paula Flicker ◽  
...  

Author(s):  
Sarah M. Rue ◽  
Paul W. Anderson ◽  
Michelle R. Gaylord ◽  
Jessica J. Miller ◽  
Scott M. Glaser ◽  
...  

2006 ◽  
Vol 7 (1) ◽  
pp. 15-22 ◽  
Author(s):  
Go Ueno ◽  
Hiroyuki Kanda ◽  
Raita Hirose ◽  
Koh Ida ◽  
Takashi Kumasaka ◽  
...  

Author(s):  
Darren W. Begley ◽  
Douglas R. Davies ◽  
Robert C. Hartley ◽  
Thomas E. Edwards ◽  
Bart L. Staker ◽  
...  

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