Enriching miRNA binding site specificity with sequence profile based filtering of 3'-UTR region of mRNA

2012 ◽  
Author(s):  
Jasjit K. Banwait ◽  
Hesham Ali ◽  
Dhundy K Bastola
Keyword(s):  
Binding Site ◽  
Site Specificity ◽  
Mirna Binding Site ◽  
Sequence Profile

CONSERVATISM OF MIRNA BINDING SITE IN MRNA OF IGFBP3 GENE AND ITS ORTHOLOGOUS GENES

2018 ◽  
Author(s):  
D. AISINA ◽  
◽  
R. NIYAZOVA ◽  
S. ATAMBAYEVA ◽  
A. IVASHCHENKO ◽  
...  
Keyword(s):  
Binding Site ◽  
Mirna Binding Site ◽  
Orthologous Genes

scholarly journals Conversion of MyoD to a Neurogenic Factor: Binding Site Specificity Determines Lineage

Cell Reports ◽  
2015 ◽  
Vol 10 (12) ◽  
pp. 1937-1946 ◽  
Author(s):  
Abraham P. Fong ◽  
Zizhen Yao ◽  
Jun Wen Zhong ◽  
Nathan M. Johnson ◽  
Gist H. Farr ◽  
...  
Keyword(s):  
Binding Site ◽  
Site Specificity ◽  
Factor Binding Site ◽  
Factor Binding ◽  
Neurogenic Factor

scholarly journals A miRNA Binding Site Single-Nucleotide Polymorphism in the 3′-UTR Region of the IL23R Gene Is Associated with Breast Cancer

PLoS ONE ◽  
2012 ◽  
Vol 7 (12) ◽  
pp. e49823 ◽  
Author(s):  
Lihong Wang ◽  
Wei Liu ◽  
Wei Jiang ◽  
Jing Lin ◽  
Yongdong Jiang ◽  
...  
Keyword(s):  
Breast Cancer ◽  
Single Nucleotide Polymorphism ◽  
Binding Site ◽  
Mirna Binding Site ◽  
Nucleotide Polymorphism ◽  
Single Nucleotide

scholarly journals Effect of variation in miRNA-binding site (rs8176318) of the BRCA1 gene in breast cancer patients

2019 ◽  
Vol 49 (5) ◽  
pp. 1433-1438 ◽  
Author(s):  
Mushtaq AHMAD ◽  
Fazal JALIL ◽  
Mutiul HAQ ◽  
Aftab Ali SHAH
Keyword(s):  
Breast Cancer ◽  
Binding Site ◽  
Cancer Patients ◽  
Brca1 Gene ◽  
Mirna Binding Site ◽  
Breast Cancer Patients

scholarly journals RUNX1 regulates site specificity of DNA demethylation by recruitment of DNA demethylation machineries in hematopoietic cells

2017 ◽  
Vol 1 (20) ◽  
pp. 1699-1711 ◽  
Author(s):  
Takahiro Suzuki ◽  
Yuri Shimizu ◽  
Erina Furuhata ◽  
Shiori Maeda ◽  
Mami Kishima ◽  
...  
Keyword(s):  
Binding Site ◽  
Binding Sites ◽  
Ectopic Expression ◽  
Hematopoietic Cells ◽  
Dna Demethylation ◽  
Site Specificity ◽  
Gene Promoters ◽  
Hematopoietic Development ◽  
Key Points

Key PointsEctopic expression of RUNX1 induces binding site–directed DNA demethylation, in which hematopoietic gene promoters are included. RUNX1 binding sites are enriched in demethylated regions during hematopoietic development.

scholarly journals The polymorphisms of miRNA-binding site in MLH3 and ERCC1 were linked to the risk of colorectal cancer in a case-control study

2018 ◽  
Vol 7 (4) ◽  
pp. 1264-1274 ◽  
Author(s):  
Qianye Zhang ◽  
Xiao Zheng ◽  
Xiaoxia Li ◽  
Deyu Sun ◽  
Ping Xue ◽  
...  
Keyword(s):  
Colorectal Cancer ◽  
Binding Site ◽  
Case Control Study ◽  
Case Control ◽  
Mirna Binding Site ◽  
Control Study

Binding-site specificity of lectins from Bauhinia purpurea alba, Sophora japonica, and Wistaria floribunda

1980 ◽  
Vol 86 (1) ◽  
pp. 123-131 ◽  
Author(s):  
Howard J. Allen ◽  
Edward A.Z. Johnson ◽  
Khushi L. Matta
Keyword(s):  
Binding Site ◽  
Site Specificity ◽  
Sophora Japonica ◽  
Bauhinia Purpurea

Investigation of miRNA-binding site variants and risk of gestational diabetes mellitus in Chinese pregnant women

2017 ◽  
Vol 54 (3) ◽  
pp. 309-316 ◽  
Author(s):  
Xiaojing Wang ◽  
Wei Li ◽  
Liangkun Ma ◽  
Fan Ping ◽  
Juntao Liu ◽  
...  
Keyword(s):  
Diabetes Mellitus ◽  
Gestational Diabetes ◽  
Gestational Diabetes Mellitus ◽  
Pregnant Women ◽  
Binding Site ◽  
Mirna Binding Site
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