Application of Machine Learning to Prediction of Surgical Site Infection

Author(s):  
Richard Ribon Fletcher ◽  
Olasubomi Olubeko ◽  
Harsh Sonthalia ◽  
Fredrick Kateera ◽  
Theoneste Nkurunziza ◽  
...  
2020 ◽  
Vol Publish Ahead of Print ◽  
Author(s):  
Steven J. Skube ◽  
Zhen Hu ◽  
Gyorgy J. Simon ◽  
Elizabeth C. Wick ◽  
Elliot G. Arsoniadis ◽  
...  

2021 ◽  
Author(s):  
Ali Haider Bangash ◽  
Tauseef Ullah ◽  
Inayat Ullah Khan ◽  
Haris Khan ◽  
Arshiya Fatima ◽  
...  

Automated machine learning is explored to develop risk models predicting surgical site infections and adverse events including seroma formation after complex spinal surgeries.


Author(s):  
Ingwon Yeo ◽  
Christian Klemt ◽  
Matthew Gerald Robinson ◽  
John G. Esposito ◽  
Akachimere Cosmas Uzosike ◽  
...  

AbstractThis is a retrospective study. Surgical site infection (SSI) is associated with adverse postoperative outcomes following total knee arthroplasty (TKA). However, accurately predicting SSI remains a clinical challenge due to the multitude of patient and surgical factors associated with SSI. This study aimed to develop and validate machine learning models for the prediction of SSI following primary TKA. This is a retrospective study for patients who underwent primary TKA. Chart review was performed to identify patients with superficial or deep SSIs, defined in concordance with the criteria of the Musculoskeletal Infection Society. All patients had a minimum follow-up of 2 years (range: 2.1–4.7 years). Five machine learning algorithms were developed to predict this outcome, and model assessment was performed by discrimination, calibration, and decision curve analysis. A total of 10,021 consecutive primary TKA patients was included in this study. At an average follow-up of 2.8 ± 1.1 years, SSIs were reported in 404 (4.0%) TKA patients, including 223 superficial SSIs and 181 deep SSIs. The neural network model achieved the best performance across discrimination (area under the receiver operating characteristic curve = 0.84), calibration, and decision curve analysis. The strongest predictors of the occurrence of SSI following primary TKA, in order, were Charlson comorbidity index, obesity (BMI >30 kg/m2), and smoking. The neural network model presented in this study represents an accurate method to predict patient-specific superficial and deep SSIs following primary TKA, which may be employed to assist in clinical decision-making to optimize outcomes in at-risk patients.


2021 ◽  
Author(s):  
GuanRui Ren ◽  
ZhiYang Xie ◽  
YiYang Wang ◽  
Lei Liu ◽  
PeiYang Wang ◽  
...  

Abstract Background: Ideal tools should not only investigate risk factors, but also provide explicit auxiliary answer for whether a patient will develop surgical site infection (SSI) or not. Machine learning (ML) models have ability to carry out complicated predictive medical tasks. We intend to develop ML models to predict SSI after posterior cervical surgery and interpret the outcome. Methods: We retrospectively analyzed 235 patients who had undergone posterior cervical surgery between June 2013 to April 2019 at Zhongda Hospital Affiliated to Southeast University. We established Artificial neural networks (ANN), XGBClassifier (xgboost), KNeighborsClassifier (KNN), Decision tree classifier (decision tree), Random forest classifier (random forest) and support vector classifier (SVC). Receiver operating characteristic (ROC) curve, area under the curve (AUC) score, accuracy score, recall score, F1 score and precision score were calculated to measure models’ performance. Shapley values were calculated using SHapley Additive exPlanations (SHAP) to determine relative feature importance of xgboost model. Results: The incidence of SSI was 7.23%. With AUC of 0.9972, 0.9923, 0.9865, 0.9615, 0.9540, 0.8934, the xgboost, random forest, ANN, KNN, decision tree, SCV accurately predicted SSI. Xgboost, ANN, decision tree and random forest achieved excellent performance in testing set. Top 10 variables with high predictive contribution of xgboost including, drainage volume, body mass index (BMI), drainage duration, operation blooding, cholesterin, sex, prognostic nutritional index (PNI), albumin, hypertension, operation time. Conclusion: We had successful established ML models in individualized predicting SSI after posterior cervical surgery. Xgboost, ANN, decision tree and random forest achieved excellent performance which could provide auxiliary information for clinical decision makers. The interpretable model focuses on contribution of important features to the predictive result. It can improve the acceptance of clinicians on ML and promote ML’s application in the actual clinical work.


2019 ◽  
Vol 47 (2) ◽  
pp. E7 ◽  
Author(s):  
Thara Tunthanathip ◽  
Sakchai Sae-heng ◽  
Thakul Oearsakul ◽  
Ittichai Sakarunchai ◽  
Anukoon Kaewborisutsakul ◽  
...  

OBJECTIVESurgical site infection (SSI) following a neurosurgical operation is a complication that impacts morbidity, mortality, and economics. Currently, machine learning (ML) algorithms are used for outcome prediction in various neurosurgical aspects. The implementation of ML algorithms to learn from medical data may help in obtaining prognostic information on diseases, especially SSIs. The purpose of this study was to compare the performance of various ML models for predicting surgical infection after neurosurgical operations.METHODSA retrospective cohort study was conducted on patients who had undergone neurosurgical operations at tertiary care hospitals between 2010 and 2017. Supervised ML algorithms, which included decision tree, naive Bayes with Laplace correction, k-nearest neighbors, and artificial neural networks, were trained and tested as binary classifiers (infection or no infection). To evaluate the ML models from the testing data set, their sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV), as well as their accuracy, receiver operating characteristic curve, and area under the receiver operating characteristic curve (AUC) were analyzed.RESULTSData were available for 1471 patients in the study period. The SSI rate was 4.6%, and the type of SSI was superficial, deep, and organ/space in 1.2%, 0.8%, and 2.6% of cases, respectively. Using the backward stepwise method, the authors determined that the significant predictors of SSI in the multivariable Cox regression analysis were postoperative CSF leakage/subgaleal collection (HR 4.24, p < 0.001) and postoperative fever (HR 1.67, p = 0.04). Compared with other ML algorithms, the naive Bayes had the highest performance with sensitivity at 63%, specificity at 87%, PPV at 29%, NPV at 96%, and AUC at 76%.CONCLUSIONSThe naive Bayes algorithm is highlighted as an accurate ML method for predicting SSI after neurosurgical operations because of its reasonable accuracy. Thus, it can be used to effectively predict SSI in individual neurosurgical patients. Therefore, close monitoring and allocation of treatment strategies can be informed by ML predictions in general practice.


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