Assessing human disease phenotype similarity based on ontology

Author(s):  
Duc-Hau Le ◽  
Anh-Minh Dao ◽  
Ba-Su Pham
2019 ◽  
Vol 9 (1) ◽  
Author(s):  
Katarzyna I. Szczerkowska ◽  
Silvia Petrezselyova ◽  
Jiri Lindovsky ◽  
Marcela Palkova ◽  
Jan Dvorak ◽  
...  

Biology Open ◽  
2021 ◽  
Vol 10 (1) ◽  
pp. bio052332 ◽  
Author(s):  
Sarita Hebbar ◽  
Malte Lehmann ◽  
Sarah Behrens ◽  
Catrin Hälsig ◽  
Weihua Leng ◽  
...  

ABSTRACTRetinitis pigmentosa (RP) is a clinically heterogeneous disease affecting 1.6 million people worldwide. The second-largest group of genes causing autosomal dominant RP in human encodes regulators of the splicing machinery. Yet, how defects in splicing factor genes are linked to the aetiology of the disease remains largely elusive. To explore possible mechanisms underlying retinal degeneration caused by mutations in regulators of the splicing machinery, we induced mutations in Drosophila Prp31, the orthologue of human PRPF31, mutations in which are associated with RP11. Flies heterozygous mutant for Prp31 are viable and develop normal eyes and retina. However, photoreceptors degenerate under light stress, thus resembling the human disease phenotype. Degeneration is associated with increased accumulation of the visual pigment rhodopsin 1 and increased mRNA levels of twinfilin, a gene associated with rhodopsin trafficking. Reducing rhodopsin levels by raising animals in a carotenoid-free medium not only attenuates rhodopsin accumulation, but also retinal degeneration. Given a similar importance of proper rhodopsin trafficking for photoreceptor homeostasis in human, results obtained in flies presented here will also contribute to further unravel molecular mechanisms underlying the human disease.This paper has an associated First Person interview with the co-first authors of the article.


2019 ◽  
Vol 104 (1) ◽  
pp. 55-64 ◽  
Author(s):  
Anurag Verma ◽  
Lisa Bang ◽  
Jason E. Miller ◽  
Yanfei Zhang ◽  
Ming Ta Michael Lee ◽  
...  

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