P6C-7 Ultrasound RF Time Series for Detection of Prostate Cancer: Feature Selection and Frame Rate Analysis

Author(s):  
M. Moradi ◽  
P. Abolmaesumi ◽  
R. Siemens ◽  
E. Sauerbrei ◽  
P. Isotalo ◽  
...  
Author(s):  
Stefano Barone ◽  
Roberto Cannella ◽  
Albert Comelli ◽  
Arianna Pellegrino ◽  
Giuseppe Salvaggio ◽  
...  

1991 ◽  
Vol 5 (2) ◽  
pp. 169-179 ◽  
Author(s):  
K.M. Ponting ◽  
S.M. Peeling

F1000Research ◽  
2016 ◽  
Vol 5 ◽  
pp. 2673 ◽  
Author(s):  
Daniel Kristiyanto ◽  
Kevin E. Anderson ◽  
Ling-Hong Hung ◽  
Ka Yee Yeung

Prostate cancer is the most common cancer among men in developed countries. Androgen deprivation therapy (ADT) is the standard treatment for prostate cancer. However, approximately one third of all patients with metastatic disease treated with ADT develop resistance to ADT. This condition is called metastatic castrate-resistant prostate cancer (mCRPC). Patients who do not respond to hormone therapy are often treated with a chemotherapy drug called docetaxel. Sub-challenge 2 of the Prostate Cancer DREAM Challenge aims to improve the prediction of whether a patient with mCRPC would discontinue docetaxel treatment due to adverse effects. Specifically, a dataset containing three distinct clinical studies of patients with mCRPC treated with docetaxel was provided. We  applied the k-nearest neighbor method for missing data imputation, the hill climbing algorithm and random forest importance for feature selection, and the random forest algorithm for classification. We also empirically studied the performance of many classification algorithms, including support vector machines and neural networks. Additionally, we found using random forest importance for feature selection provided slightly better results than the more computationally expensive method of hill climbing.


Author(s):  
Seonho Kim ◽  
Jungjoon Kim ◽  
Hong-Woo Chun

Interest in research involving health-medical information analysis based on artificial intelligence, especially for deep learning techniques, has recently been increasing. Most of the research in this field has been focused on searching for new knowledge for predicting and diagnosing disease by revealing the relation between disease and various information features of data. These features are extracted by analyzing various clinical pathology data, such as EHR (electronic health records), and academic literature using the techniques of data analysis, natural language processing, etc. However, still needed are more research and interest in applying the latest advanced artificial intelligence-based data analysis technique to bio-signal data, which are continuous physiological records, such as EEG (electroencephalography) and ECG (electrocardiogram). Unlike the other types of data, applying deep learning to bio-signal data, which is in the form of time series of real numbers, has many issues that need to be resolved in preprocessing, learning, and analysis. Such issues include leaving feature selection, learning parts that are black boxes, difficulties in recognizing and identifying effective features, high computational complexities, etc. In this paper, to solve these issues, we provide an encoding-based Wave2vec time series classifier model, which combines signal-processing and deep learning-based natural language processing techniques. To demonstrate its advantages, we provide the results of three experiments conducted with EEG data of the University of California Irvine, which are a real-world benchmark bio-signal dataset. After converting the bio-signals (in the form of waves), which are a real number time series, into a sequence of symbols or a sequence of wavelet patterns that are converted into symbols, through encoding, the proposed model vectorizes the symbols by learning the sequence using deep learning-based natural language processing. The models of each class can be constructed through learning from the vectorized wavelet patterns and training data. The implemented models can be used for prediction and diagnosis of diseases by classifying the new data. The proposed method enhanced data readability and intuition of feature selection and learning processes by converting the time series of real number data into sequences of symbols. In addition, it facilitates intuitive and easy recognition, and identification of influential patterns. Furthermore, real-time large-capacity data analysis is facilitated, which is essential in the development of real-time analysis diagnosis systems, by drastically reducing the complexity of calculation without deterioration of analysis performance by data simplification through the encoding process.


2021 ◽  
Author(s):  
Mikhail Kanevski

<p>Nowadays a wide range of methods and tools to study and forecast time series is available. An important problem in forecasting concerns embedding of time series, i.e. construction of a high dimensional space where forecasting problem is considered as a regression task. There are several basic linear and nonlinear approaches of constructing such space by defining an optimal delay vector using different theoretical concepts. Another way is to consider this space as an input feature space – IFS, and to apply machine learning feature selection (FS) algorithms to optimize IFS according to the problem under study (analysis, modelling or forecasting). Such approach is an empirical one: it is based on data and depends on the FS algorithms applied. In machine learning features are generally classified as relevant, redundant and irrelevant. It gives a reach possibility to perform advanced multivariate time series exploration and development of interpretable predictive models.</p><p>Therefore, in the present research different FS algorithms are used to analyze fundamental properties of time series from empirical point of view. Linear and nonlinear simulated time series are studied in detail to understand the advantages and drawbacks of the proposed approach. Real data case studies deal with air pollution and wind speed times series. Preliminary results are quite promising and more research is in progress.</p>


Sign in / Sign up

Export Citation Format

Share Document